BLASTX nr result

ID: Coptis23_contig00027794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027794
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593490.1| hypothetical protein MTR_2g012750 [Medicago ...    60   2e-07

>ref|XP_003593490.1| hypothetical protein MTR_2g012750 [Medicago truncatula]
           gi|355482538|gb|AES63741.1| hypothetical protein
           MTR_2g012750 [Medicago truncatula]
          Length = 265

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
 Frame = +2

Query: 2   ESPVKRSDQHWLNNRSDVGGKSVYAGQVTRPRNLMQNGVM------RDQGEXXXXXXXXP 163
           ESP ++S    L        +++ + ++ + R+ M NG +      RD GE        P
Sbjct: 141 ESPARKSPARRLEQSP--AKRNIGSSRIVQRRDQMGNGGIKNQPHRRDAGEVSGRRSRSP 198

Query: 164 ATRIDVGGNNRPGILRSQSGKRVVRSLGRNAVLAPEIG-QNLEGSKEKWQVKESLEDPLV 340
           ATR D  G+ R  + RS S ++  +S G+     PE G + +E         ESLE+PLV
Sbjct: 199 ATRTD-NGSTRSVVGRSLSARKTNQSPGKGRTAVPENGGRKMESKWPSTANDESLENPLV 257

Query: 341 SLECFIFL 364
           SLECFIFL
Sbjct: 258 SLECFIFL 265


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