BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027792
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26901.3| unnamed protein product [Vitis vinifera]               66   6e-09
emb|CAN79049.1| hypothetical protein VITISV_004868 [Vitis vinifera]    65   8e-09
gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]                 61   2e-07
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g...    60   3e-07
ref|NP_680160.2| winged-helix DNA-binding transcription factor f...    60   5e-07

>emb|CBI26901.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/79 (46%), Positives = 52/79 (65%)
 Frame = +1

Query: 109 EKYIDERLPSVMPSLLCAPDHPPYADMIIRAIRTLGEKRGSKKLSISNFINESYKNLPLQ 288
           +K I++RL  + P ++  PDHPPYA MI+ AI+TL EKRGS + S+S FI  +Y+ +P  
Sbjct: 25  KKCIEKRLLQLFP-VIRTPDHPPYAWMILDAIKTLKEKRGSSEKSLSEFIKSNYE-VPWA 82

Query: 289 HDLILTRDLQRLVQVGQIV 345
           H   L+  L +L Q G IV
Sbjct: 83  HSSYLSHHLCKLAQNGDIV 101


>emb|CAN79049.1| hypothetical protein VITISV_004868 [Vitis vinifera]
          Length = 444

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 43/114 (37%), Positives = 65/114 (57%)
 Frame = +1

Query: 4   EEERRARHMKKFKDAMLQISMSKNPHRSPDQLVMLEKYIDERLPSVMPSLLCAPDHPPYA 183
           +  ++ R+M K K A+L      +     ++    +K I++RL  + P ++  PDHPPYA
Sbjct: 15  QNHKQKRNMDKLKKAVLGAMTLDSATPLSEET---KKCIEKRLLQLFP-VIRTPDHPPYA 70

Query: 184 DMIIRAIRTLGEKRGSKKLSISNFINESYKNLPLQHDLILTRDLQRLVQVGQIV 345
            MI+ AI+TL EKRGS + S+S FI +S   +P  H   L+  L +L Q G IV
Sbjct: 71  WMILDAIKTLKEKRGSSEKSLSEFI-KSNXEVPWAHSSYLSHHLCKLAQNGDIV 123


>gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]
          Length = 546

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 29/72 (40%), Positives = 43/72 (59%)
 Frame = +1

Query: 145 PSLLCAPDHPPYADMIIRAIRTLGEKRGSKKLSISNFINESYKNLPLQHDLILTRDLQRL 324
           P+   +P HPPYA+MI  AI  L E+ GS +++I+ +I+  Y NLP  H  +LT  L+RL
Sbjct: 36  PAPSFSPTHPPYAEMITAAITALKERDGSSRIAIAKYIDRVYTNLPPNHSALLTHHLKRL 95

Query: 325 VQVGQIVCIYKS 360
              G +  +  S
Sbjct: 96  KNSGYLAMVKHS 107


>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
           gi|223525178|gb|EEF27887.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 435

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = +1

Query: 145 PSLLCAPDHPPYADMIIRAIRTLGEKRGSKKLSISNFINESYKNLPLQHDLILTRDLQRL 324
           P++  + +HPPY DMI  AI  L E+ GS K +I+ +I   Y  LP  H  +LT  L+RL
Sbjct: 61  PTVAQSFNHPPYTDMIYAAITALKERDGSSKRAIAKYIERVYPGLPPTHSALLTHHLKRL 120

Query: 325 VQVGQIVCIYKS 360
              G +V + KS
Sbjct: 121 KNTGLLVMVKKS 132


>ref|NP_680160.2| winged-helix DNA-binding transcription factor family protein
           [Arabidopsis thaliana] gi|50897176|gb|AAT85727.1|
           At5g08780 [Arabidopsis thaliana]
           gi|53828619|gb|AAU94419.1| At5g08780 [Arabidopsis
           thaliana] gi|332003966|gb|AED91349.1| winged-helix
           DNA-binding transcription factor family protein
           [Arabidopsis thaliana]
          Length = 457

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 36/113 (31%), Positives = 62/113 (54%)
 Frame = +1

Query: 10  ERRARHMKKFKDAMLQISMSKNPHRSPDQLVMLEKYIDERLPSVMPSLLCAPDHPPYADM 189
           ER+  +++ F   M+ ++ S++    P+  +  +K++D  L          PDHP Y+ M
Sbjct: 13  ERKVENLRGF---MVNLANSRD-FSLPETKLFQQKFLDLCLSRT-------PDHPTYSAM 61

Query: 190 IIRAIRTLGEKRGSKKLSISNFINESYKNLPLQHDLILTRDLQRLVQVGQIVC 348
           I  AI  L ++ G+ + +IS FI   YKNLP  H  +L+  L +LV+  +I+C
Sbjct: 62  IFIAIMDLNKEGGASEDAISEFIKSKYKNLPFAHTNLLSHHLAKLVEKREILC 114