BLASTX nr result

ID: Coptis23_contig00027782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027782
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889617.1| hypothetical protein ARALYDRAFT_470701 [Arab...    66   3e-09
ref|NP_563771.1| alpha-1,4-galacturonosyltransferase [Arabidopsi...    64   1e-08
ref|XP_003520189.1| PREDICTED: probable galacturonosyltransferas...    64   2e-08
ref|XP_003536852.1| PREDICTED: probable galacturonosyltransferas...    63   2e-08
ref|XP_002520989.1| Glycosyltransferase QUASIMODO1, putative [Ri...    63   3e-08

>ref|XP_002889617.1| hypothetical protein ARALYDRAFT_470701 [Arabidopsis lyrata subsp.
           lyrata] gi|297335459|gb|EFH65876.1| hypothetical protein
           ARALYDRAFT_470701 [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/85 (40%), Positives = 55/85 (64%)
 Frame = -3

Query: 266 MRQGLKCQRXXXXXXXXXSVFTPILFLSKRLSTFTSSLAHKEFLEDLSTPKYRTDTLKLN 87
           M+Q  + QR         SVF P++F+S RL + T  +  +EF+E+LS  ++RT+ L+L+
Sbjct: 1   MKQIRRWQRILILSLLSISVFAPLIFVSNRLKSITP-VGRREFIEELSKTRFRTNDLRLS 59

Query: 86  SIQQETGEGLKEPQLFVYKDEKSNN 12
           +I+ E GEGLK P+L ++KD   N+
Sbjct: 60  AIEHEDGEGLKGPRLMLFKDGDFNS 84


>ref|NP_563771.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]
           gi|75191689|sp|Q9M9Y5.1|GAUT6_ARATH RecName:
           Full=Probable galacturonosyltransferase 6
           gi|7523701|gb|AAF63140.1|AC011001_10 Unknown protein
           [Arabidopsis thaliana] gi|15028087|gb|AAK76574.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259311|gb|AAM14391.1| unknown protein [Arabidopsis
           thaliana] gi|332189914|gb|AEE28035.1|
           alpha-1,4-galacturonosyltransferase [Arabidopsis
           thaliana]
          Length = 589

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/86 (38%), Positives = 56/86 (65%)
 Frame = -3

Query: 266 MRQGLKCQRXXXXXXXXXSVFTPILFLSKRLSTFTSSLAHKEFLEDLSTPKYRTDTLKLN 87
           M+Q  + QR         SVF P++F+S RL + T  +  +EF+E+LS  ++ T+ L+L+
Sbjct: 1   MKQIRRWQRILILALLSISVFAPLIFVSNRLKSITP-VGRREFIEELSKIRFTTNDLRLS 59

Query: 86  SIQQETGEGLKEPQLFVYKDEKSNNN 9
           +I+ E GEGLK P+L ++KD + N++
Sbjct: 60  AIEHEDGEGLKGPRLILFKDGEFNSS 85


>ref|XP_003520189.1| PREDICTED: probable galacturonosyltransferase 6-like [Glycine max]
          Length = 585

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/76 (46%), Positives = 46/76 (60%)
 Frame = -3

Query: 251 KCQRXXXXXXXXXSVFTPILFLSKRLSTFTSSLAHKEFLEDLSTPKYRTDTLKLNSIQQE 72
           +CQR         SV  P++F+S RL+  T  L   EFLEDL    YR DTLKLN+++QE
Sbjct: 6   RCQRILILSLFFLSVVAPLVFVSHRLNLLTL-LGRGEFLEDLYRATYRGDTLKLNAVEQE 64

Query: 71  TGEGLKEPQLFVYKDE 24
             EGL+EP   VY ++
Sbjct: 65  GAEGLEEPNQVVYTEK 80


>ref|XP_003536852.1| PREDICTED: probable galacturonosyltransferase 6-like [Glycine max]
          Length = 585

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/75 (45%), Positives = 46/75 (61%)
 Frame = -3

Query: 248 CQRXXXXXXXXXSVFTPILFLSKRLSTFTSSLAHKEFLEDLSTPKYRTDTLKLNSIQQET 69
           CQR         SV  P++F+S RL+  T  L  +EFLEDL    YR DTLKLN+++QE 
Sbjct: 7   CQRILLLSLFFLSVVAPLVFVSHRLNLLTL-LGRREFLEDLYRATYRGDTLKLNAVEQEG 65

Query: 68  GEGLKEPQLFVYKDE 24
            +GL+EP   VY ++
Sbjct: 66  ADGLEEPNQVVYTEK 80


>ref|XP_002520989.1| Glycosyltransferase QUASIMODO1, putative [Ricinus communis]
           gi|223539826|gb|EEF41406.1| Glycosyltransferase
           QUASIMODO1, putative [Ricinus communis]
          Length = 633

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
 Frame = -3

Query: 209 VFTPILFLSKRLSTFTSSLAHKEFLEDLST--PKYRTDTLKLNSIQQETGEGLKEPQLFV 36
           VF+P+LF+S RL  FT     +EF +DLST   KY+TDT+ LN+I+QE GE LK P+L +
Sbjct: 25  VFSPLLFVSTRLRNFTPD-GKQEFADDLSTFVHKYKTDTVILNAIEQEEGEELKGPKLHI 83

Query: 35  YKDE 24
           Y+++
Sbjct: 84  YEEK 87


Top