BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027772
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...    79   3e-13
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    78   7e-13
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    78   9e-13
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              76   3e-12
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              76   3e-12

>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/107 (33%), Positives = 55/107 (51%)
 Frame = -1

Query: 354 SNSYLGIDFNLAKPNHISTSRIMKNVLSRIQKWNTKFLSMVGRSTLIKSVVSTIPVYSMQ 175
           +  YLG+   + +    + S +   V  R+Q W  + LS  G+  LIKSVV +IP Y+M 
Sbjct: 203 NEKYLGLPIYMGRSRSQTFSYLKDRVWKRLQGWKERLLSKAGKEILIKSVVQSIPTYAMS 262

Query: 174 TNLFNKSFCHNLDMISANFWWGHNEHGSNKLHMLNWSACCSKKSMGG 34
                K+ C+ L  +   FWW   E+  NK+H ++W   C +K  GG
Sbjct: 263 CFDLTKTLCNELGSLVCRFWWAQQEN-ENKVHWVSWELLCRRKEQGG 308


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/108 (34%), Positives = 52/108 (48%)
 Frame = -1

Query: 357 TSNSYLGIDFNLAKPNHISTSRIMKNVLSRIQKWNTKFLSMVGRSTLIKSVVSTIPVYSM 178
           ++  YLG+  N+ K        I K + SRIQ W  K LS  G+  LIK+V  +IP Y+M
Sbjct: 327 STEKYLGLPVNIGKSRKKPFEYIKKKIWSRIQGWQEKLLSKAGKEILIKAVAQSIPTYAM 386

Query: 177 QTNLFNKSFCHNLDMISANFWWGHNEHGSNKLHMLNWSACCSKKSMGG 34
                 K  C  L  I   +WW   +  +NK+H ++W      K  GG
Sbjct: 387 SCFDLTKGLCDELSSIIGRYWWSQQDK-ANKIHWISWEKLTQSKEKGG 433


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = -1

Query: 363  TNTSNSYLGIDFNLAKPNHISTSRIMKNVLSRIQKWNTKFLSMVGRSTLIKSVVSTIPVY 184
            T T   YLG      +P     + I++ + +R+  W  + L+  GR TL  SV+STIP Y
Sbjct: 746  TTTLGKYLGFPMLQGRPKRSDFNFILEKMQTRLASWKNRLLNRTGRLTLATSVLSTIPTY 805

Query: 183  SMQTNLFNKSFCHNLDMISANFWW-GHNEHGSNKLHMLNWSACCSKKSMGG 34
             MQ N   ++ C ++D  + NF W G N  G   +H++NW      KS+GG
Sbjct: 806  YMQINWLPQNICDSIDQTARNFLWKGSNNKG---IHLVNWKTITRPKSIGG 853


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 32/112 (28%), Positives = 62/112 (55%)
 Frame = -1

Query: 369  PLTNTSNSYLGIDFNLAKPNHISTSRIMKNVLSRIQKWNTKFLSMVGRSTLIKSVVSTIP 190
            P+  +  +YLGI     + +  + + ++  + +++  W    L+M GR  L+++ ++T+P
Sbjct: 1278 PVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVP 1337

Query: 189  VYSMQTNLFNKSFCHNLDMISANFWWGHNEHGSNKLHMLNWSACCSKKSMGG 34
             Y+MQ      S C+ +D    NF WGH+ + + KLH +NW+  C  ++ GG
Sbjct: 1338 TYTMQVMALPVSTCNEIDKTCRNFLWGHDTN-TRKLHSVNWAEICKPRNEGG 1388


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 32/112 (28%), Positives = 62/112 (55%)
 Frame = -1

Query: 369  PLTNTSNSYLGIDFNLAKPNHISTSRIMKNVLSRIQKWNTKFLSMVGRSTLIKSVVSTIP 190
            P+  +  +YLGI     + +  + + ++  + +++  W    L+M GR  L+++ ++T+P
Sbjct: 746  PVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVP 805

Query: 189  VYSMQTNLFNKSFCHNLDMISANFWWGHNEHGSNKLHMLNWSACCSKKSMGG 34
             Y+MQ      S C+ +D    NF WGH+ + + KLH +NW+  C  ++ GG
Sbjct: 806  TYTMQVMALPVSTCNEIDKTCRNFLWGHDTN-TRKLHSVNWAEICKPRNEGG 856