BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027771
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]   134   5e-44
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          116   5e-36
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               103   1e-31
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   135   5e-30
emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]    99   6e-28

>emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]
          Length = 474

 Score =  134 bits (338), Expect(2) = 5e-44
 Identities = 65/81 (80%), Positives = 77/81 (95%)
 Frame = +3

Query: 114 GKLSTSKVEGKGKVVMRLTSGKELTLNEVLYVPDIRKNLVSGSLLSKNGFKLVFVSDKFV 293
           G  S+SKVEG+GKV++++TSGKELTLN+VL+VPDIRKNLVS SLLSKNGFKLVFVSDKFV
Sbjct: 269 GYSSSSKVEGRGKVILKMTSGKELTLNDVLHVPDIRKNLVSRSLLSKNGFKLVFVSDKFV 328

Query: 294 LTKNDVFVGKGYLQDGLFRMS 356
           LTKN++FVGKGYL DGLF+M+
Sbjct: 329 LTKNEMFVGKGYLSDGLFKMN 349



 Score = 68.2 bits (165), Expect(2) = 5e-44
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +1

Query: 1   VGNEREWWVDTGATRHICSNKSMFTTYHVVEKEEQLFM 114
           VGN +EWWVDTGATRHICSNK MF+TY  VE+ E+LFM
Sbjct: 231 VGNTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFM 268


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  116 bits (291), Expect(2) = 5e-36
 Identities = 53/81 (65%), Positives = 72/81 (88%)
 Frame = +3

Query: 114 GKLSTSKVEGKGKVVMRLTSGKELTLNEVLYVPDIRKNLVSGSLLSKNGFKLVFVSDKFV 293
           G  +TS++EG+GKV +++TSGKELTLN VLYVP+IRKNLVSGSLL+K+GF++VF SD  V
Sbjct: 357 GNSATSEIEGQGKVALKMTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVV 416

Query: 294 LTKNDVFVGKGYLQDGLFRMS 356
           L+KN ++VGKGY+ DGLF+++
Sbjct: 417 LSKNGMYVGKGYVNDGLFKLN 437



 Score = 59.7 bits (143), Expect(2) = 5e-36
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = +1

Query: 7   NEREWWVDTGATRHICSNKSMFTTYHVVEKEEQLFMEN 120
           N REWW+DTGATRH+CS+K +FT++      E+LFM N
Sbjct: 321 NPREWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGN 358


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  103 bits (256), Expect(2) = 1e-31
 Identities = 48/81 (59%), Positives = 67/81 (82%)
 Frame = +3

Query: 114 GKLSTSKVEGKGKVVMRLTSGKELTLNEVLYVPDIRKNLVSGSLLSKNGFKLVFVSDKFV 293
           G  +T+++ G GKV++++TSGK LTLN VL+VP IRKNLV  +LL KNGFK V VSDK V
Sbjct: 401 GNTTTTRIAGTGKVMLKMTSGKVLTLNNVLHVPTIRKNLVYVALLVKNGFKCVLVSDKTV 460

Query: 294 LTKNDVFVGKGYLQDGLFRMS 356
           ++KN++F+GKGYL +GLF+++
Sbjct: 461 ISKNEMFLGKGYLTEGLFKLN 481



 Score = 58.2 bits (139), Expect(2) = 1e-31
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = +1

Query: 1   VGNEREWWVDTGATRHICSNKSMFTTYHVVEKEEQLFMENFLRPRL 138
           VGN +EW++D+GATRHICS K +F TY  VE +E LFM N    R+
Sbjct: 363 VGNPKEWFLDSGATRHICSAKEVFATYTHVEVDEDLFMGNTTTTRI 408


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/81 (79%), Positives = 77/81 (95%)
 Frame = +3

Query: 114 GKLSTSKVEGKGKVVMRLTSGKELTLNEVLYVPDIRKNLVSGSLLSKNGFKLVFVSDKFV 293
           G  S+SK+EG+GKV++++TSGKELTLN+VL+VPDI KNLVSGSLLSKNGFKLVFVSDKFV
Sbjct: 495 GNSSSSKIEGRGKVILKMTSGKELTLNDVLHVPDICKNLVSGSLLSKNGFKLVFVSDKFV 554

Query: 294 LTKNDVFVGKGYLQDGLFRMS 356
           LTKN++FVGKGYL DGLF+M+
Sbjct: 555 LTKNEMFVGKGYLSDGLFKMN 575



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = +1

Query: 7   NEREWWVDTGATRHICSNKSMFTTYHVVEKEEQLFMENFLRPRLKAK 147
           N +EWWVDTGATRHICSNK MF+TY  VE+ E+LFM N    +++ +
Sbjct: 459 NTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGNSSSSKIEGR 505


>emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]
          Length = 565

 Score = 99.4 bits (246), Expect(2) = 6e-28
 Identities = 51/81 (62%), Positives = 62/81 (76%)
 Frame = +3

Query: 114 GKLSTSKVEGKGKVVMRLTSGKELTLNEVLYVPDIRKNLVSGSLLSKNGFKLVFVSDKFV 293
           G   ++ V GKGKV+++LTSGK L L +VL+VPDIR NLVS SLL K G K++F SDK V
Sbjct: 225 GDSRSTPVIGKGKVLLKLTSGKVLALCDVLHVPDIRWNLVSVSLLGKAGVKILFESDKIV 284

Query: 294 LTKNDVFVGKGYLQDGLFRMS 356
           LTKND FVGKGY   GLFR++
Sbjct: 285 LTKNDAFVGKGYCNQGLFRLN 305



 Score = 49.7 bits (117), Expect(2) = 6e-28
 Identities = 23/35 (65%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
 Frame = +1

Query: 13  REWWVDTGATRHICSNKSMFTTYHVV-EKEEQLFM 114
           +EW VD+GATRHIC N+S FT+Y  V E EEQ+FM
Sbjct: 190 KEWVVDSGATRHICGNRSAFTSYTTVKEGEEQVFM 224