BLASTX nr result

ID: Coptis23_contig00027764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027764
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|222858894|gb|EEE96441.1|
           predicted protein [Populus trichocarpa]
          Length = 1337

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/88 (40%), Positives = 50/88 (56%)
 Frame = -3

Query: 266 YNMEQTNAYSIEDDSSVQERNCLSSIRYPLLEVNETGLESCKGPSTVEEFNLLIEKIEYR 87
           ++M++  A ++E D SVQE+       +PLLEV E  L +   PS  +EF L +E +E +
Sbjct: 191 FDMDE-KACALEYDGSVQEQAHFHHNTFPLLEVEEMSLRTFTNPSMEDEFLLFLEHVESK 249

Query: 86  HWTQNNNLTDNGKGLLKSTDIDILECLS 3
            W Q N L  +G  LL S   DILE LS
Sbjct: 250 -WGQENILHIDGNELLGSMHFDILEFLS 276


Top