BLASTX nr result

ID: Coptis23_contig00027756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027756
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267626.2| PREDICTED: vacuolar protein sorting-associat...   228   3e-58
emb|CBI38711.3| unnamed protein product [Vitis vinifera]              228   3e-58
ref|XP_002320230.1| predicted protein [Populus trichocarpa] gi|2...   214   8e-54
ref|XP_003529870.1| PREDICTED: vacuolar protein sorting-associat...   211   6e-53
ref|XP_004134283.1| PREDICTED: vacuolar protein sorting-associat...   209   2e-52

>ref|XP_002267626.2| PREDICTED: vacuolar protein sorting-associated protein 8 homolog
           [Vitis vinifera]
          Length = 1979

 Score =  228 bits (582), Expect = 3e-58
 Identities = 111/147 (75%), Positives = 128/147 (87%), Gaps = 3/147 (2%)
 Frame = -3

Query: 433 SPKVLAVHANFIAVGMSKGLILVVPCKYSAQNADKMDAKMLLLASQG---HSPVTSMCFN 263
           SP+VLAVH NFIAVGMS+G+++VVP KYSA NAD MDAK+L+L  QG   H+PVTSMCFN
Sbjct: 477 SPQVLAVHLNFIAVGMSRGVVMVVPSKYSAYNADNMDAKILMLGLQGERSHAPVTSMCFN 536

Query: 262 QQGDLLLAGYGNGQVVLWDVQKVAMAKVITGEHTAPVVHTLFLGQYSQVTRQFKAVTGDC 83
            QGDLLLAGYG+G + +WDVQ+   AKVITGEH+APV+HTLFLGQ SQVTRQFKAVTGD 
Sbjct: 537 HQGDLLLAGYGDGHITVWDVQRATAAKVITGEHSAPVIHTLFLGQDSQVTRQFKAVTGDS 596

Query: 82  KGLVLLHAFSIVPLVNHFSITTKCLLD 2
           KGLVLLHAFS+VPL+N FSI T+CLLD
Sbjct: 597 KGLVLLHAFSVVPLLNRFSIKTQCLLD 623


>emb|CBI38711.3| unnamed protein product [Vitis vinifera]
          Length = 1934

 Score =  228 bits (582), Expect = 3e-58
 Identities = 111/147 (75%), Positives = 128/147 (87%), Gaps = 3/147 (2%)
 Frame = -3

Query: 433 SPKVLAVHANFIAVGMSKGLILVVPCKYSAQNADKMDAKMLLLASQG---HSPVTSMCFN 263
           SP+VLAVH NFIAVGMS+G+++VVP KYSA NAD MDAK+L+L  QG   H+PVTSMCFN
Sbjct: 432 SPQVLAVHLNFIAVGMSRGVVMVVPSKYSAYNADNMDAKILMLGLQGERSHAPVTSMCFN 491

Query: 262 QQGDLLLAGYGNGQVVLWDVQKVAMAKVITGEHTAPVVHTLFLGQYSQVTRQFKAVTGDC 83
            QGDLLLAGYG+G + +WDVQ+   AKVITGEH+APV+HTLFLGQ SQVTRQFKAVTGD 
Sbjct: 492 HQGDLLLAGYGDGHITVWDVQRATAAKVITGEHSAPVIHTLFLGQDSQVTRQFKAVTGDS 551

Query: 82  KGLVLLHAFSIVPLVNHFSITTKCLLD 2
           KGLVLLHAFS+VPL+N FSI T+CLLD
Sbjct: 552 KGLVLLHAFSVVPLLNRFSIKTQCLLD 578


>ref|XP_002320230.1| predicted protein [Populus trichocarpa] gi|222861003|gb|EEE98545.1|
           predicted protein [Populus trichocarpa]
          Length = 1976

 Score =  214 bits (544), Expect = 8e-54
 Identities = 109/163 (66%), Positives = 126/163 (77%), Gaps = 19/163 (11%)
 Frame = -3

Query: 433 SPKVLAVHANFIAVGMSKGLILVVPCKYSAQNADKMDAK----------------MLLLA 302
           SP+VLAVH N+IAVGMSKG+I+VVP +YS+ N D MDAK                ML+L 
Sbjct: 431 SPQVLAVHLNYIAVGMSKGVIVVVPSRYSSHNDDNMDAKWMSLPFVFLLLLKDGKMLMLG 490

Query: 301 SQG---HSPVTSMCFNQQGDLLLAGYGNGQVVLWDVQKVAMAKVITGEHTAPVVHTLFLG 131
            QG   H+PVTSMCFNQQGD+LLAGYG+G + +WDVQ+ + AKVITGEHTAPVVH  FLG
Sbjct: 491 LQGDRSHAPVTSMCFNQQGDMLLAGYGDGHITVWDVQRASAAKVITGEHTAPVVHAFFLG 550

Query: 130 QYSQVTRQFKAVTGDCKGLVLLHAFSIVPLVNHFSITTKCLLD 2
           Q SQVTRQFKAVTGD KGLVLLHAFS+VPL+N FS  T+CLLD
Sbjct: 551 QDSQVTRQFKAVTGDSKGLVLLHAFSVVPLLNRFSFKTQCLLD 593


>ref|XP_003529870.1| PREDICTED: vacuolar protein sorting-associated protein 8 homolog
           [Glycine max]
          Length = 1886

 Score =  211 bits (536), Expect = 6e-53
 Identities = 106/147 (72%), Positives = 120/147 (81%), Gaps = 3/147 (2%)
 Frame = -3

Query: 433 SPKVLAVHANFIAVGMSKGLILVVPCKYSAQNADKMDAKMLLLASQG---HSPVTSMCFN 263
           S + LAVHAN+IAVGMSKGLI+V P KYS  +AD  D KM++LA QG   H+PVTSM FN
Sbjct: 381 STRALAVHANYIAVGMSKGLIVVFPSKYSIHHADNSDGKMMMLAIQGDRLHAPVTSMSFN 440

Query: 262 QQGDLLLAGYGNGQVVLWDVQKVAMAKVITGEHTAPVVHTLFLGQYSQVTRQFKAVTGDC 83
           QQGDLLLAGYG+G + LWDVQK  +AKVI+GEHTAPVVHTLFLGQ  Q TRQFKAVTGDC
Sbjct: 441 QQGDLLLAGYGDGHLTLWDVQKGVVAKVISGEHTAPVVHTLFLGQDPQNTRQFKAVTGDC 500

Query: 82  KGLVLLHAFSIVPLVNHFSITTKCLLD 2
           KGLVL H  S+VPL + FSI T+CLLD
Sbjct: 501 KGLVLFHIISVVPLFSRFSIKTQCLLD 527


>ref|XP_004134283.1| PREDICTED: vacuolar protein sorting-associated protein 8 homolog
           [Cucumis sativus]
          Length = 1936

 Score =  209 bits (532), Expect = 2e-52
 Identities = 103/146 (70%), Positives = 122/146 (83%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 PKVLAVHANFIAVGMSKGLILVVPCKYSAQNADKMDAKMLLLASQGH---SPVTSMCFNQ 260
           P+VLAVHAN+IAVGMSKG I+VV  KYSAQN D MDAKM+LL SQG    +P TS+CF+Q
Sbjct: 449 PQVLAVHANYIAVGMSKGNIVVVASKYSAQNGDNMDAKMILLGSQGDKSTAPATSLCFSQ 508

Query: 259 QGDLLLAGYGNGQVVLWDVQKVAMAKVITGEHTAPVVHTLFLGQYSQVTRQFKAVTGDCK 80
           QGDLLLAGY +G + +WDV + + AKVI+GEH +PVVH+LFLGQ +QVTRQFKAVTGD K
Sbjct: 509 QGDLLLAGYSDGHITVWDVLRASAAKVISGEHASPVVHSLFLGQEAQVTRQFKAVTGDSK 568

Query: 79  GLVLLHAFSIVPLVNHFSITTKCLLD 2
           GLVLLH FS+VPL+N FS  T+CLLD
Sbjct: 569 GLVLLHTFSVVPLLNRFSSKTQCLLD 594


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