BLASTX nr result

ID: Coptis23_contig00027752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027752
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37575.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinif...   139   3e-31
ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
dbj|BAD98515.1| TONSOKU protein [Nicotiana tabacum]                   111   7e-23
ref|XP_003630220.1| Protein BRUSHY [Medicago truncatula] gi|3575...   110   1e-22

>emb|CBI37575.3| unnamed protein product [Vitis vinifera]
          Length = 1342

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/123 (52%), Positives = 88/123 (71%)
 Frame = +2

Query: 2    QNENDTSFNLHMSHDEHSQDITFKIDDNMMRVDARSCMVRDMLSTERMKVEIACLYYLQQ 181
            Q  +     LH S   + Q I FKI++++++++A  CMV DMLS E +KVE+ACLYYLQ 
Sbjct: 711  QKHSAADLKLHTSEGAYGQYIAFKIENDLIQIEAAPCMVDDMLSIESLKVEVACLYYLQL 770

Query: 182  SEEKKSRGLLPIISHMKCGGRTLESFEPVETLMNNIWEKGPMEVLIDGWVQKRLMKSYID 361
              +K+SRGLLPII HM+CGG+ LESFE + T  + +   G +EV +DGWVQKRL+K Y+D
Sbjct: 771  PVDKRSRGLLPIIQHMRCGGKALESFEAIGTFKDTL-GNGWVEVFVDGWVQKRLIKLYVD 829

Query: 362  CCK 370
            CCK
Sbjct: 830  CCK 832


>ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinifera]
          Length = 1309

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/114 (56%), Positives = 86/114 (75%)
 Frame = +2

Query: 29   LHMSHDEHSQDITFKIDDNMMRVDARSCMVRDMLSTERMKVEIACLYYLQQSEEKKSRGL 208
            LH S   + Q I FKI++++++++A  CMV DMLS E +KVE+ACLYYLQ   +K+SRGL
Sbjct: 687  LHTSEGAYGQYIAFKIENDLIQIEAAPCMVDDMLSIESLKVEVACLYYLQLPVDKRSRGL 746

Query: 209  LPIISHMKCGGRTLESFEPVETLMNNIWEKGPMEVLIDGWVQKRLMKSYIDCCK 370
            LPII HM+CGG+ LESFE + T  + +   G +EV +DGWVQKRL+K Y+DCCK
Sbjct: 747  LPIIQHMRCGGKALESFEAIGTFKDTL-GNGWVEVFVDGWVQKRLIKLYVDCCK 799


>ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|222852793|gb|EEE90340.1|
            predicted protein [Populus trichocarpa]
          Length = 1353

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/123 (53%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
 Frame = +2

Query: 11   NDTSFNLHMSHDEHSQDITFKIDDNMMRVDARSCMVRDMLSTERMKVEIACLYYLQQSEE 190
            N     LH S ++ +Q I F+ID+++++VDA S +  D LS E M VE+ACLYYLQ   E
Sbjct: 729  NAAHLRLHNSENDDNQCIVFRIDNDLIQVDAASYLAFDKLSIESMTVELACLYYLQLPTE 788

Query: 191  KKSRGLLPIISHMKCGGRTLESFEPVETL---MNNIWEKGPMEVLIDGWVQKRLMKSYID 361
            K+S+GLLPI+ HMKC GR L+S E  ETL     NI     +EV I+GWVQKRLMK YID
Sbjct: 789  KRSKGLLPIVQHMKCHGRVLDSIEAFETLKGDQGNIL----IEVSINGWVQKRLMKLYID 844

Query: 362  CCK 370
            CC+
Sbjct: 845  CCE 847


>dbj|BAD98515.1| TONSOKU protein [Nicotiana tabacum]
          Length = 1370

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/122 (47%), Positives = 78/122 (63%)
 Frame = +2

Query: 5    NENDTSFNLHMSHDEHSQDITFKIDDNMMRVDARSCMVRDMLSTERMKVEIACLYYLQQS 184
            N+N +   LH    EH Q I F+I +N++ V   S     +L+ E+MKVE+ACLYYLQ  
Sbjct: 738  NDNISDLTLHAC-GEHCQHILFRIGNNLVHVKWDSGNAGTLLNLEQMKVEVACLYYLQLP 796

Query: 185  EEKKSRGLLPIISHMKCGGRTLESFEPVETLMNNIWEKGPMEVLIDGWVQKRLMKSYIDC 364
             E++S+GL+P+I HM   GR +ES E V  L +N+  K  +EV ID WV K LMK YIDC
Sbjct: 797  AEERSKGLVPVIQHMMHDGRLIESLEAVSILNDNMAGKACIEVSIDVWVPKHLMKLYIDC 856

Query: 365  CK 370
            C+
Sbjct: 857  CE 858


>ref|XP_003630220.1| Protein BRUSHY [Medicago truncatula] gi|357519875|ref|XP_003630226.1|
            Protein BRUSHY [Medicago truncatula]
            gi|355524242|gb|AET04696.1| Protein BRUSHY [Medicago
            truncatula] gi|355524248|gb|AET04702.1| Protein BRUSHY
            [Medicago truncatula]
          Length = 1130

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/112 (45%), Positives = 71/112 (63%)
 Frame = +2

Query: 35   MSHDEHSQDITFKIDDNMMRVDARSCMVRDMLSTERMKVEIACLYYLQQSEEKKSRGLLP 214
            M H  H + I  +I ++++ V+   C   D    + +K  +AC +YLQ   EKKS GLLP
Sbjct: 728  MHHSLHDRYIACRIGNDIVYVEEALCAAGDQFDIDSLKAVVACKFYLQFPAEKKSEGLLP 787

Query: 215  IISHMKCGGRTLESFEPVETLMNNIWEKGPMEVLIDGWVQKRLMKSYIDCCK 370
            II H+KC GR LES E VE +M ++ +   +E  IDGW+QKRL+K Y+DCCK
Sbjct: 788  IIQHIKCAGRDLESLETVENIMEHL-QNNMVEAFIDGWIQKRLIKMYVDCCK 838


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