BLASTX nr result

ID: Coptis23_contig00027751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027751
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283165.1| PREDICTED: uncharacterized protein LOC100249...   152   2e-35
ref|XP_002330826.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_004138779.1| PREDICTED: uncharacterized protein LOC101209...   137   8e-31
ref|XP_002878752.1| hypothetical protein ARALYDRAFT_481294 [Arab...   131   6e-29
ref|NP_850052.1| chaperone protein dnaJ-related protein [Arabido...   131   6e-29

>ref|XP_002283165.1| PREDICTED: uncharacterized protein LOC100249288 isoform 1 [Vitis
           vinifera] gi|296081792|emb|CBI20797.3| unnamed protein
           product [Vitis vinifera]
          Length = 101

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/97 (73%), Positives = 80/97 (82%), Gaps = 3/97 (3%)
 Frame = -2

Query: 474 VLPSSSTNRPSFR---PLRFSSVQQTQQQDEVGIMCEPCSGKGWLLCGFCNGQKTNVKAE 304
           +LPSSS++    R   P   + +QQ Q+Q +VGIMCEPC+GKGWLLC FC GQKTNVKAE
Sbjct: 1   MLPSSSSSTMGMRFLKPPHCAPLQQIQEQIDVGIMCEPCNGKGWLLCDFCKGQKTNVKAE 60

Query: 303 NNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDGE 193
           NNRIYRRCPSCRAIGYVLCSKCKVFKCVTFP+  DGE
Sbjct: 61  NNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPNYDDGE 97


>ref|XP_002330826.1| predicted protein [Populus trichocarpa] gi|222872628|gb|EEF09759.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/113 (61%), Positives = 84/113 (74%), Gaps = 8/113 (7%)
 Frame = -2

Query: 507 TLLSTKVKMIQVLPS--SSTNRPSF-RPLRFS-----SVQQTQQQDEVGIMCEPCSGKGW 352
           T+   K+  ++ LPS  ++T  P F +P+  S      VQ+ QQQ   GIMCEPC+GKGW
Sbjct: 5   TVAPAKISYLRSLPSWPANTTTPRFLKPVNCSPPLQQQVQEEQQQVASGIMCEPCNGKGW 64

Query: 351 LLCGFCNGQKTNVKAENNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDGE 193
           LLC FC G KTNVKA+N R+YRRCPSCRAIGYVLCSKCKVFKCVTFP+ +DGE
Sbjct: 65  LLCDFCKGLKTNVKADNKRLYRRCPSCRAIGYVLCSKCKVFKCVTFPNYNDGE 117


>ref|XP_004138779.1| PREDICTED: uncharacterized protein LOC101209431 [Cucumis sativus]
           gi|449499504|ref|XP_004160834.1| PREDICTED:
           uncharacterized LOC101209431 [Cucumis sativus]
          Length = 112

 Score =  137 bits (346), Expect = 8e-31
 Identities = 65/109 (59%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
 Frame = -2

Query: 519 SMASTLLSTKVKMIQVLPS-SSTNRPSFRPLRFSSVQQTQQQDEVGIMCEPCSGKGWLLC 343
           ++A+TL  TK+ +++  PS SS+ R SF   R S +QQ Q    +   CEPC+GKGW++C
Sbjct: 3   TIATTL--TKINLVRFSPSRSSSPRSSFNFARCSPIQQVQADSTID--CEPCNGKGWIVC 58

Query: 342 GFCNGQKTNVKAENNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDG 196
            FC GQKTNVK E NRIYRRCP+CRA+GYVLCS CKVFKCVTFP+ +DG
Sbjct: 59  DFCEGQKTNVKVEKNRIYRRCPTCRAVGYVLCSNCKVFKCVTFPNFNDG 107


>ref|XP_002878752.1| hypothetical protein ARALYDRAFT_481294 [Arabidopsis lyrata subsp.
           lyrata] gi|297324591|gb|EFH55011.1| hypothetical protein
           ARALYDRAFT_481294 [Arabidopsis lyrata subsp. lyrata]
          Length = 126

 Score =  131 bits (330), Expect = 6e-29
 Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 8/100 (8%)
 Frame = -2

Query: 468 PSSSTNRPSFRPLRFSSVQQTQQQ--------DEVGIMCEPCSGKGWLLCGFCNGQKTNV 313
           PS  ++R   +P R   +QQ + Q        DE  I+CE C+GKGWL+C  CNGQKTNV
Sbjct: 23  PSPRSHRCLLKPFRCVPLQQQEPQLEQSQQGDDEAVILCEDCNGKGWLICDVCNGQKTNV 82

Query: 312 KAENNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDGE 193
           K+ENNRIYRRCP+C+A+G+VLC KCKVFKCVTFP+  DG+
Sbjct: 83  KSENNRIYRRCPTCKAVGFVLCRKCKVFKCVTFPNSEDGD 122


>ref|NP_850052.1| chaperone protein dnaJ-related protein [Arabidopsis thaliana]
           gi|44917527|gb|AAS49088.1| At2g24395 [Arabidopsis
           thaliana] gi|62321035|dbj|BAD94100.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330252477|gb|AEC07571.1| chaperone protein
           dnaJ-related protein [Arabidopsis thaliana]
          Length = 132

 Score =  131 bits (330), Expect = 6e-29
 Identities = 60/104 (57%), Positives = 75/104 (72%), Gaps = 12/104 (11%)
 Frame = -2

Query: 468 PSSSTNRPS----FRPLRFSSVQQTQQQ--------DEVGIMCEPCSGKGWLLCGFCNGQ 325
           P+SST+R      F+P R   +Q+ + Q        D   I+CE C+GKGWLLC FC GQ
Sbjct: 25  PASSTSRRKQRRLFKPFRCVPLQEQEPQLDQSQQGDDNAVILCEDCNGKGWLLCDFCKGQ 84

Query: 324 KTNVKAENNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDGE 193
           KTNVK+ENNRIYRRCP+C+A+G+VLC KCKVFKCVTFP+  DG+
Sbjct: 85  KTNVKSENNRIYRRCPTCKAVGFVLCRKCKVFKCVTFPNSEDGD 128


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