BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027748
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    56   3e-06
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    56   3e-06
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = -3

Query: 271 SSKFSGCKPNCIYFTDNLILHFYRCKFGGQDFGIFSLEDGSIEKFLYPDDNLLI-LPSPI 95
           S  F GCK NCIY+TD+     Y    G QD GIF+LEDGSIE    P  +  I  P P+
Sbjct: 325 SVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPL--PCSHFRIRWPPPL 382

Query: 94  WFAPN 80
           W  PN
Sbjct: 383 WVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = -3

Query: 271 SSKFSGCKPNCIYFTDNLILHFYRCKFGGQDFGIFSLEDGSIEKFLYPDDNLLI-LPSPI 95
           S  F GCK NCIY+TD+     Y    G QD GIF+LEDGSIE    P  +  I  P P+
Sbjct: 325 SVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPL--PCSHFRIRWPPPL 382

Query: 94  WFAPN 80
           W  PN
Sbjct: 383 WVTPN 387


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
 Frame = -3

Query: 271 SSKFSGCKPNCIYFTDNLILHFYRCKFGGQDFGIFSLEDGSIEKF-LYPDDNL--LILPS 101
           +S  SGC  +CIY+TD+   + Y    G  D GIF L DGSIE    YP ++   L  P 
Sbjct: 325 ASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPP 384

Query: 100 PIWFAPN 80
           P+W +PN
Sbjct: 385 PLWISPN 391