BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027736
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor]        49   6e-08
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    50   3e-07
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]    50   3e-07
emb|CAN72510.1| hypothetical protein VITISV_040730 [Vitis vinifera]    51   3e-07
emb|CAN81282.1| hypothetical protein VITISV_037391 [Vitis vinifera]    49   5e-07

>gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor]
          Length = 1998

 Score = 48.5 bits (114), Expect(2) = 6e-08
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = -3

Query: 168  FQSRIWVEANMTKTKVFEVG--EERLETFVRTMGCEKGSLPCRYLGLPLG 25
            F     ++ N+ K+ +  +   EERL+T  RT GC KGS P  YLGLPLG
Sbjct: 1517 FSEATGLKVNLQKSMMLPINMDEERLDTLARTFGCSKGSFPFTYLGLPLG 1566



 Score = 33.1 bits (74), Expect(2) = 6e-08
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -1

Query: 251  ILQFADDALFLVDASISHLLVAKSVLLIFKAVSGLR 144
            I+Q+ADD L + +     LL+ KS++  F   +GL+
Sbjct: 1489 IIQYADDTLIIAEGDTRQLLILKSIINTFSEATGLK 1524


>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 50.1 bits (118), Expect(2) = 3e-07
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = -3

Query: 168  FQSRIWVEANMTKTKVFEVGEE-RLETFVRTMGCEKGSLPCRYLGLPLGASY 16
            F++   ++ N+ KT+   VGE+  +ET    +GC+ GSLP  YLGLPLGA Y
Sbjct: 3117 FEAISGLKVNLNKTEAIPVGEDIPMETLAAVLGCKIGSLPTSYLGLPLGAPY 3168



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 257  VTILQFADDALFLVDASISHLLVAKSVLLIFKAVSGLR 144
            V+ L FADD L   DA    L       + F+A+SGL+
Sbjct: 3087 VSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLK 3124


>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
          Length = 1728

 Score = 50.1 bits (118), Expect(2) = 3e-07
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = -3

Query: 168 FQSRIWVEANMTKTKVFEVGEE-RLETFVRTMGCEKGSLPCRYLGLPLGASY 16
           F++   ++ N+ KT+   VGE+  +ET    +GC+ GSLP  YLGLPLGA Y
Sbjct: 797 FEAISGLKVNLNKTEAIPVGEDIPMETLAAVLGCKIGSLPTSYLGLPLGAPY 848



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 257 VTILQFADDALFLVDASISHLLVAKSVLLIFKAVSGLR 144
           V+ L FADD L   DA    L       + F+A+SGL+
Sbjct: 767 VSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLK 804


>emb|CAN72510.1| hypothetical protein VITISV_040730 [Vitis vinifera]
          Length = 797

 Score = 51.2 bits (121), Expect(2) = 3e-07
 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = -3

Query: 168 FQSRIWVEANMTKTKVFEVGEE-RLETFVRTMGCEKGSLPCRYLGLPLGASY 16
           F++   ++ N++KT+ F VGE   +ET    +GC+ GSLP  YLGLPLGA Y
Sbjct: 444 FEAIAGLKVNLSKTEAFXVGEGIPMETLXSVLGCKIGSLPTTYLGLPLGAPY 495



 Score = 28.1 bits (61), Expect(2) = 3e-07
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 257 VTILQFADDALFLVDASISHLLVAKSVLLIFKAVSGLR 144
           V+ L FADD L   DA    L       + F+A++GL+
Sbjct: 414 VSHLLFADDTLIFCDAEADELQYLSWTFMWFEAIAGLK 451


>emb|CAN81282.1| hypothetical protein VITISV_037391 [Vitis vinifera]
          Length = 1449

 Score = 49.3 bits (116), Expect(2) = 5e-07
 Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = -3

Query: 168  FQSRIWVEANMTKTKVFEVGE-ERLETFVRTMGCEKGSLPCRYLGLPLGASYINKAV 1
            F++   +  N+ K+++F VGE E +E  V  +GC  GSLP  YLGLPLGA + + +V
Sbjct: 976  FEAASGLRINLGKSEIFPVGEVEEVEELVVELGCRVGSLPSSYLGLPLGAHHNSLSV 1032



 Score = 29.3 bits (64), Expect(2) = 5e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 257  VTILQFADDALFLVDASISHLLVAKSVLLIFKAVSGLR 144
            ++ L FADD +   +A   HL      L  F+A SGLR
Sbjct: 946  ISHLLFADDTVVFCEAKKEHLTYLNWTLFWFEAASGLR 983