BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027733
         (1846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   600   e-169
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   526   e-147
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   520   e-145
emb|CBI19224.3| unnamed protein product [Vitis vinifera]              503   e-140
ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containi...   499   e-139

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like
            [Vitis vinifera]
          Length = 475

 Score =  600 bits (1548), Expect = e-169
 Identities = 289/413 (69%), Positives = 351/413 (84%)
 Frame = +1

Query: 1    YKHALEIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPL 180
            +KHALEI++WM +QN F+MS ADHAI LELIIK++SLAEAEEYFE++P+SSS+KAAC+PL
Sbjct: 59   HKHALEILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPL 118

Query: 181  LQSYVKERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNRI 360
            L +YVKER   KAEALMLK+  LG TV+PHPFNEMMKLY AT QFE+V  VI QMK N+I
Sbjct: 119  LHAYVKERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKI 178

Query: 361  PRNVLSYNIWMNACSQLSGVATVEAVYREMLNDKSVKVGWSTHSTLANIYINSGLVEKAT 540
            P NVLSYN+WM+ACS++SG+A+ E VY++M++DK+V+VGWST STLANIY+ SGL++KA 
Sbjct: 179  PLNVLSYNLWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKAN 238

Query: 541  AALKTAEQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILLCL 720
             ALK AE+ LS H RLGYFFLIT+YASL NK+ +LRLWEASK V GR+TS NYM ILLCL
Sbjct: 239  LALKNAEKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCL 298

Query: 721  VKIGDIAEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNY 900
            VK+GDIAEAE++FR WES+C KYDIRVSN+LLGAY+R+G +DKAESLHLHTLE+GGCPNY
Sbjct: 299  VKLGDIAEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNY 358

Query: 901  KTWEILMEGWVKNKEMDKAISAMKKGFSMLKHCDWRPSSTTVMAIAEYFEECGRYEEAQK 1080
            KTWEILMEGW+K++ MDKAI+AMKKGFSMLKHCDWRP+   V AIA Y EE G   +  +
Sbjct: 359  KTWEILMEGWMKSQNMDKAINAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQ 418

Query: 1081 YVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLVK 1239
            YV V+ +LG+A LPLYKSLLR+ +  Q+P  DILKMMEKD IE+D+E   LV+
Sbjct: 419  YVKVIHQLGVAKLPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMDDETSALVQ 471


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
            predicted protein [Populus trichocarpa]
          Length = 511

 Score =  526 bits (1356), Expect = e-147
 Identities = 252/414 (60%), Positives = 324/414 (78%), Gaps = 2/414 (0%)
 Frame = +1

Query: 1    YKHALEIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPL 180
            YK ALEI+ WM +QN+FR++   HA+++ELI+KV  L +A EYFE IP S S+KAA +PL
Sbjct: 94   YKQALEILQWMENQNNFRITPGHHALMMELIVKVNGLNKAGEYFERIPGSGSKKAASLPL 153

Query: 181  LQSYVKERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNRI 360
            L  YVKER+  KAE+ M+K+ + G  V PHP+NEMMKLY A  Q+EKV  VI +MK N++
Sbjct: 154  LHGYVKERDISKAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEKVPLVIAEMKRNKL 213

Query: 361  PRNVLSYNIWMNACSQLSGVATVEAVYREMLNDKSVKVGWSTHSTLANIYINSGLVEKAT 540
             RNVLSYN+WM A  ++  VA  E VY+EM++D++V VGWST ++LAN+YI +G V+KA 
Sbjct: 214  CRNVLSYNLWMGAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLANVYIKAGFVDKAL 273

Query: 541  AALKTAEQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILLCL 720
              LK AE  LS + RLGYFFLITLY+SL NK+G+LRLWEASKAV GR+  A+YM ++ CL
Sbjct: 274  LVLKDAEMKLSTNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGGRIPCADYMCVISCL 333

Query: 721  VKIGDIAEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNY 900
            VK+GD+  AE+VF  WE+ C KYDIRVSN+LLGAYVR+G + KAES HLHT+E+GGCPNY
Sbjct: 334  VKVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKAESFHLHTVERGGCPNY 393

Query: 901  KTWEILMEGWVKNKEMDKAISAMKKGFSMLK--HCDWRPSSTTVMAIAEYFEECGRYEEA 1074
            KTWEILMEGWVK+++MDKAI AMKKGFS+LK   CDWRPS + +MAIAE+FE+ G +E+A
Sbjct: 394  KTWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNFEDA 453

Query: 1075 QKYVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLV 1236
              Y+  +  LG+A+LPLYK  LR+++  Q+PA DILKMMEKD IE+D+E   LV
Sbjct: 454  NHYIKAVHGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIELDDETSALV 507


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  520 bits (1338), Expect = e-145
 Identities = 256/417 (61%), Positives = 321/417 (76%), Gaps = 1/417 (0%)
 Frame = +1

Query: 1    YKHALEIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIP-DSSSQKAACIP 177
            YKHALEI +WM +Q +FRMS +D+A+ LELIIKV  + EAEEYF  IP DS ++KAA   
Sbjct: 77   YKHALEIFTWMETQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFA 136

Query: 178  LLQSYVKERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNR 357
            LL  YVK ++  KAEALM+K+  LG  VN +PFNEMMKLY AT Q+EKV  VI QMK N+
Sbjct: 137  LLHGYVKVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNK 196

Query: 358  IPRNVLSYNIWMNACSQLSGVATVEAVYREMLNDKSVKVGWSTHSTLANIYINSGLVEKA 537
            I  N+LSYN+WM++  ++S V  VE VY+EM+ND +V+VGWST +TLANIY  +G+V+KA
Sbjct: 197  IALNLLSYNLWMSSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKA 256

Query: 538  TAALKTAEQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILLC 717
              ALK AE++LS    LGYFFL+T Y+SL NK+G+ RLWEA K V GR+T ANYM +L C
Sbjct: 257  LLALKNAEKILSTSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSC 316

Query: 718  LVKIGDIAEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPN 897
            LVK+GD+ EAEKVFR WE  CRKYDIRVSN+LLGAYVR G ++KAESLHLHTL++GGCPN
Sbjct: 317  LVKVGDLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPN 376

Query: 898  YKTWEILMEGWVKNKEMDKAISAMKKGFSMLKHCDWRPSSTTVMAIAEYFEECGRYEEAQ 1077
            YKT EILMEGWVK+++MDKAI AM +  SML+HC WRPS   +M+IAE+ E    +E+A 
Sbjct: 377  YKTLEILMEGWVKSQKMDKAIDAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFEDAN 436

Query: 1078 KYVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLVKCLN 1248
             ++ V+  LG+ASLPLYK LLR+ +  Q+ A DILKMMEKD IE+D+E   LV+  N
Sbjct: 437  HFIQVIHHLGVASLPLYKVLLRMHLHAQRAAFDILKMMEKDKIELDDETSALVQAFN 493


>emb|CBI19224.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  503 bits (1296), Expect = e-140
 Identities = 240/330 (72%), Positives = 292/330 (88%)
 Frame = +1

Query: 1    YKHALEIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPL 180
            +KHALEI++WM +QN F+MS ADHAI LELIIK++SLAEAEEYFE++P+SSS+KAAC+PL
Sbjct: 86   HKHALEILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPL 145

Query: 181  LQSYVKERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNRI 360
            L +YVKER   KAEALMLK+  LG TV+PHPFNEMMKLY AT QFE+V  VI QMK N+I
Sbjct: 146  LHAYVKERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKI 205

Query: 361  PRNVLSYNIWMNACSQLSGVATVEAVYREMLNDKSVKVGWSTHSTLANIYINSGLVEKAT 540
            P NVLSYN+WM+ACS++SG+A+ E VY++M++DK+V+VGWST STLANIY+ SGL++KA 
Sbjct: 206  PLNVLSYNLWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKAN 265

Query: 541  AALKTAEQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILLCL 720
             ALK AE+ LS H RLGYFFLIT+YASL NK+ +LRLWEASK V GR+TS NYM ILLCL
Sbjct: 266  LALKNAEKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCL 325

Query: 721  VKIGDIAEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNY 900
            VK+GDIAEAE++FR WES+C KYDIRVSN+LLGAY+R+G +DKAESLHLHTLE+GGCPNY
Sbjct: 326  VKLGDIAEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNY 385

Query: 901  KTWEILMEGWVKNKEMDKAISAMKKGFSML 990
            KTWEILMEGW+K++ MDKAI+AMKKGFS++
Sbjct: 386  KTWEILMEGWMKSQNMDKAINAMKKGFSII 415


>ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like
            [Glycine max]
          Length = 496

 Score =  499 bits (1286), Expect = e-139
 Identities = 245/419 (58%), Positives = 316/419 (75%), Gaps = 2/419 (0%)
 Frame = +1

Query: 1    YKHALEIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPL 180
            Y HALE+  W+ +Q +F M  ADHA+ LELII+   L EAEEYF N+PDS+++KAAC+ L
Sbjct: 78   YHHALEVFEWIKNQKNFHMIPADHAMKLELIIENHGLMEAEEYFMNLPDSAAKKAACLIL 137

Query: 181  LQSYVKERETGKAEALMLKMQALGYTVNPHPFNEMMKLYDATGQFEKVLYVIQQMKHNRI 360
            L+ YV++R+T KAE  MLK+  LG  V+PHPFNEMMKLY  T ++ KV  VIQQMK N+I
Sbjct: 138  LRGYVRDRDTSKAETFMLKLYELGLVVSPHPFNEMMKLYLVTCEYRKVPLVIQQMKRNKI 197

Query: 361  PRNVLSYNIWMNACSQLSG--VATVEAVYREMLNDKSVKVGWSTHSTLANIYINSGLVEK 534
            P NVLSYN+WMNACS+  G  VA VE V+R+MLND++V+VGW + +TLAN Y  +G  +K
Sbjct: 198  PCNVLSYNLWMNACSEEEGYVVAAVETVFRQMLNDRNVEVGWGSLATLANAYKKAGQSKK 257

Query: 535  ATAALKTAEQMLSMHKRLGYFFLITLYASLGNKDGILRLWEASKAVTGRMTSANYMSILL 714
            A   LK AE+ LS   RLG+FFLITLYASL +K+G+LRLWEASKAV GR++ ANY+ IL 
Sbjct: 258  AILVLKDAEKKLSTCNRLGHFFLITLYASLKDKEGVLRLWEASKAVRGRISCANYICILT 317

Query: 715  CLVKIGDIAEAEKVFRSWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCP 894
            CLVK+GDI +A+++F  WES C+KYDIRVSN+LLGAYVR+G +++AESLHLHTL+KGGCP
Sbjct: 318  CLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYVRNGLMEEAESLHLHTLQKGGCP 377

Query: 895  NYKTWEILMEGWVKNKEMDKAISAMKKGFSMLKHCDWRPSSTTVMAIAEYFEECGRYEEA 1074
            NYKT EILMEG+V  ++MD+AI  MK+  +M+K C WRP    V+AIAEY E+ G  E A
Sbjct: 378  NYKTLEILMEGYVNWQKMDEAIITMKRALAMMKDCHWRPPHGIVLAIAEYLEKDGNLEYA 437

Query: 1075 QKYVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLVKCLNQ 1251
             KY+  +  LG+ SL LYK LLR+ +   KP   ILKMM++D +EID E   ++K   +
Sbjct: 438  DKYITDIHNLGLVSLSLYKVLLRMHLSANKPPFHILKMMDEDKVEIDNETLSILKAFTE 496