BLASTX nr result

ID: Coptis23_contig00027731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027731
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524010.1| PREDICTED: G2/mitotic-specific cyclin-1-like...   164   5e-39
gb|AEO86797.1| cyclin [Camellia sinensis]                             164   7e-39
ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223...   160   1e-37
ref|NP_001241621.1| uncharacterized protein LOC100812029 [Glycin...   159   2e-37
ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37

>ref|XP_003524010.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Glycine max]
          Length = 406

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/140 (58%), Positives = 101/140 (72%), Gaps = 1/140 (0%)
 Frame = +2

Query: 5   DCVIIDVENNNMSG-DSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXXIDCGDSENP 181
           DC I+D+++++  G D +VP++VKHTEA                       ID  D ++P
Sbjct: 87  DCDIVDIDDDDGDGSDDAVPVFVKHTEAMLDEIDKIEEVEMEDVEEEPVLDIDACDRKDP 146

Query: 182 LAVVEYVEDIYSFYKSSESSNCVSPNYMAQQYDINERMRAILIDWLIEVHYKFELMDETL 361
           LAVVEY++DIYSFYK  E+S+CVSPNYM  Q DINERMRAILIDWLIEVHYKFEL++ETL
Sbjct: 147 LAVVEYIDDIYSFYKDIENSSCVSPNYMTSQLDINERMRAILIDWLIEVHYKFELLEETL 206

Query: 362 FLTVNLIDRFLEHQAIDRKR 421
           FLTVNLIDRFLE QA+ R +
Sbjct: 207 FLTVNLIDRFLERQAVIRNK 226


>gb|AEO86797.1| cyclin [Camellia sinensis]
          Length = 439

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/139 (59%), Positives = 98/139 (70%)
 Frame = +2

Query: 5   DCVIIDVENNNMSGDSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXXIDCGDSENPL 184
           DC IIDV++   +GDS VPM+V+HTEA                       ID  D  NPL
Sbjct: 120 DCSIIDVDDYKAAGDSPVPMFVQHTEAMLEEIDRMEVEMEDTTDDPVDD-IDTSDKRNPL 178

Query: 185 AVVEYVEDIYSFYKSSESSNCVSPNYMAQQYDINERMRAILIDWLIEVHYKFELMDETLF 364
           AVVEY++DIY++YK  ESS+CV PNY+ QQ+DINERMR ILIDWLIEVHYKFELMDETL+
Sbjct: 179 AVVEYIDDIYAYYKKVESSSCVLPNYIGQQFDINERMRGILIDWLIEVHYKFELMDETLY 238

Query: 365 LTVNLIDRFLEHQAIDRKR 421
           LTVNLIDRFL  Q + RK+
Sbjct: 239 LTVNLIDRFLAVQPVVRKK 257


>ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223551376|gb|EEF52862.1|
           cyclin B, putative [Ricinus communis]
          Length = 438

 Score =  160 bits (404), Expect = 1e-37
 Identities = 81/141 (57%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
 Frame = +2

Query: 2   EDCVIIDVEN-NNMSGDSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXXIDCGDSEN 178
           EDC IID E+ N  +GD SVPM+V+HTEA                       ID  D +N
Sbjct: 116 EDCTIIDAEDYNKTNGDFSVPMFVQHTEAMLEEIDRMEEVEMEDVVEEPFMDIDSYDKKN 175

Query: 179 PLAVVEYVEDIYSFYKSSESSNCVSPNYMAQQYDINERMRAILIDWLIEVHYKFELMDET 358
           PLAVVEY++D+Y+FY+ +E S+C   NYM+QQ DINERMR ILIDWLIEVHYKFELMDET
Sbjct: 176 PLAVVEYIDDLYNFYRKAELSSCAPSNYMSQQSDINERMRGILIDWLIEVHYKFELMDET 235

Query: 359 LFLTVNLIDRFLEHQAIDRKR 421
           L+LTVNLIDRFL    + RK+
Sbjct: 236 LYLTVNLIDRFLAVHPVVRKK 256


>ref|NP_001241621.1| uncharacterized protein LOC100812029 [Glycine max]
           gi|255635303|gb|ACU18005.1| unknown [Glycine max]
          Length = 415

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/140 (57%), Positives = 101/140 (72%), Gaps = 1/140 (0%)
 Frame = +2

Query: 5   DCVIIDVENNNMSG-DSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXXIDCGDSENP 181
           DC I+D+++++  G D +VP++VKHTEA                       ID  D ++ 
Sbjct: 96  DCDIVDIDDDDGDGSDDAVPVFVKHTEAMLDEIDKIEEVEMEDVEEEPVLDIDACDRKDT 155

Query: 182 LAVVEYVEDIYSFYKSSESSNCVSPNYMAQQYDINERMRAILIDWLIEVHYKFELMDETL 361
           LAVVEY++DIYSFYK  E+S+ VSPNYM  Q+DINERMRAILIDWL+EVHYKFEL++ETL
Sbjct: 156 LAVVEYIDDIYSFYKDIENSSRVSPNYMNSQFDINERMRAILIDWLVEVHYKFELLEETL 215

Query: 362 FLTVNLIDRFLEHQAIDRKR 421
           FLTVNLIDRFLE QA+ RK+
Sbjct: 216 FLTVNLIDRFLERQAVIRKK 235


>ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|222857240|gb|EEE94787.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/140 (57%), Positives = 94/140 (67%)
 Frame = +2

Query: 2   EDCVIIDVENNNMSGDSSVPMYVKHTEAXXXXXXXXXXXXXXXXXXXXXXXIDCGDSENP 181
           EDC IIDVE    S D S P +V+HTEA                       ID  D  +P
Sbjct: 115 EDCNIIDVEGYKTSDDFSAPTFVQHTEAMLEEIDRMDEVEMEDVEEEPVLDIDGCDKRDP 174

Query: 182 LAVVEYVEDIYSFYKSSESSNCVSPNYMAQQYDINERMRAILIDWLIEVHYKFELMDETL 361
           LAVVEY++D+Y+FYK +E S CV PNYMAQQ+DIN+RMR ILIDWLIEVHYKFELM+ETL
Sbjct: 175 LAVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDINDRMRGILIDWLIEVHYKFELMEETL 234

Query: 362 FLTVNLIDRFLEHQAIDRKR 421
           +LTVNLIDRFL    + RK+
Sbjct: 235 YLTVNLIDRFLAVHPVVRKK 254


Top