BLASTX nr result

ID: Coptis23_contig00027722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027722
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269768.2| PREDICTED: uncharacterized protein LOC100267...    65   7e-09
emb|CBI31222.3| unnamed protein product [Vitis vinifera]               65   7e-09
emb|CAN79515.1| hypothetical protein VITISV_010406 [Vitis vinifera]    65   7e-09
ref|XP_002525704.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003553343.1| PREDICTED: uncharacterized protein LOC100783...    56   3e-06

>ref|XP_002269768.2| PREDICTED: uncharacterized protein LOC100267295 [Vitis vinifera]
          Length = 695

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -2

Query: 393 IFLAVVPLKFIIMTSVVYIFITNAMKRGKNAESDRSQRRLKEWWDSIPAIPVQTAD 226
           I +AVVPLKFI M +  + F T + K GK   +D+  RRLKEWWDSIP +PV+  D
Sbjct: 641 ILVAVVPLKFIFMATTTFYFTTTS-KLGKYIANDKGNRRLKEWWDSIPVVPVEIED 695


>emb|CBI31222.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -2

Query: 393 IFLAVVPLKFIIMTSVVYIFITNAMKRGKNAESDRSQRRLKEWWDSIPAIPVQTAD 226
           I +AVVPLKFI M +  + F T + K GK   +D+  RRLKEWWDSIP +PV+  D
Sbjct: 617 ILVAVVPLKFIFMATTTFYFTTTS-KLGKYIANDKGNRRLKEWWDSIPVVPVEIED 671


>emb|CAN79515.1| hypothetical protein VITISV_010406 [Vitis vinifera]
          Length = 670

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -2

Query: 393 IFLAVVPLKFIIMTSVVYIFITNAMKRGKNAESDRSQRRLKEWWDSIPAIPVQTAD 226
           I +AVVPLKFI M +  + F T + K GK   +D+  RRLKEWWDSIP +PV+  D
Sbjct: 616 ILVAVVPLKFIFMATTTFYFTTTS-KLGKYIANDKGNRRLKEWWDSIPVVPVEIED 670


>ref|XP_002525704.1| conserved hypothetical protein [Ricinus communis]
           gi|223535004|gb|EEF36687.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 662

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/57 (56%), Positives = 39/57 (68%)
 Frame = -2

Query: 393 IFLAVVPLKFIIMTSVVYIFITNAMKRGKNAESDRSQRRLKEWWDSIPAIPVQTADK 223
           I  AV+PLK+IIM+  +Y FI  + K GK  E+ +  RRLKEWWDSIP IPV   DK
Sbjct: 605 ITFAVIPLKYIIMSITLYGFIVTS-KLGKYMENKQGNRRLKEWWDSIPVIPVHIEDK 660


>ref|XP_003553343.1| PREDICTED: uncharacterized protein LOC100783299 [Glycine max]
          Length = 674

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = -2

Query: 393 IFLAVVPLKFIIMTSVVYIFITNAMKRGKNAESDRSQRRLKEWWDSIPAIPVQTAD 226
           I LAV+P KF +M  ++  F    M  GK++ S    RRL+EWWDSIP +P++  D
Sbjct: 613 ILLAVIPFKFFLMALILQSF---TMTLGKSSGSGTGNRRLREWWDSIPIVPIRVVD 665


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