BLASTX nr result

ID: Coptis23_contig00027718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027718
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542111.1| PREDICTED: UPF0202 protein At1g10490-like [G...   123   2e-26
ref|XP_003630123.1| N-acetyltransferase-like protein [Medicago t...   119   3e-25
ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis ...   119   3e-25
ref|XP_003594384.1| N-acetyltransferase-like protein [Medicago t...   117   2e-24
ref|XP_001767476.1| predicted protein [Physcomitrella patens sub...    94   1e-17

>ref|XP_003542111.1| PREDICTED: UPF0202 protein At1g10490-like [Glycine max]
          Length = 1041

 Score =  123 bits (309), Expect = 2e-26
 Identities = 88/213 (41%), Positives = 102/213 (47%), Gaps = 40/213 (18%)
 Frame = +3

Query: 30  MNGSSISSHNRRSETGIVKKDSEGISGMQQDLVL*SANVAR------------WEQGEVT 173
           MN   ISSH R     +V +D+EG+S  +Q L      ++              +QG   
Sbjct: 203 MNILPISSHIRSITPVLVNEDAEGLSKAKQGLKKLKEQLSENYLVGLIRKCCTLDQGHAV 262

Query: 174 IELPDGILGKALRKTVPLLAGRVCGKSAALGLSIAGAVAAGPVF*LRVVLAFVQRSPLVS 353
           +   D IL K LR TV LLAGR CGKSAALGLSIAGA+AAG                   
Sbjct: 263 VTFLDAILSKTLRGTVALLAGRGCGKSAALGLSIAGAIAAG------------------- 303

Query: 354 DHTVFCVSFLRYSNIFVTAPSPENLKALFEFVVKGLDALGYK------------------ 479
                      YSNIFVTAPSP+NLK LFEF++KG +AL YK                  
Sbjct: 304 -----------YSNIFVTAPSPDNLKTLFEFILKGFEALDYKEHINVVKSGKNTVRINIY 352

Query: 480 ----------YIKLHEHEKLSQVELLAVDEAAA 548
                     YI  HEHEKLS  ELL VDEAAA
Sbjct: 353 KHEHHIQTIQYILPHEHEKLSLAELLVVDEAAA 385


>ref|XP_003630123.1| N-acetyltransferase-like protein [Medicago truncatula]
           gi|355524145|gb|AET04599.1| N-acetyltransferase-like
           protein [Medicago truncatula]
          Length = 1123

 Score =  119 bits (298), Expect = 3e-25
 Identities = 90/218 (41%), Positives = 102/218 (46%), Gaps = 45/218 (20%)
 Frame = +3

Query: 30  MNGSSISSHNRRSETGIVKKDSEGISGMQQDLVL*SANV-------------ARWEQGEV 170
           +N   ISSH R  +   V++DSEG+S   Q+L      +             +  +QG+ 
Sbjct: 203 LNVLPISSHIRSIKPVPVEEDSEGLSEAYQELKKLKEELNGDFPVGPLIRKCSTLDQGKA 262

Query: 171 TIELPDGILGKALRKTVPLLAGRVCGKSAALGLSIAGAVAAGPVF*LRVVLAFVQRSPLV 350
            I   D IL K LR TV LLA R  GKSAALGLSIAGA+AAG                  
Sbjct: 263 VITFLDAILDKKLRSTVALLAARGRGKSAALGLSIAGAIAAG------------------ 304

Query: 351 SDHTVFCVSFLRYSNIFVTAPSPENLKALFEFVVKGLDALGYK----------------- 479
                       YSNIFVTAPSPENLK LFEF+ KG D L YK                 
Sbjct: 305 ------------YSNIFVTAPSPENLKTLFEFICKGFDVLEYKEHEDFDVKSVGESKNAT 352

Query: 480 ---------------YIKLHEHEKLSQVELLAVDEAAA 548
                          YI  HEHEKLSQVELL VDEAAA
Sbjct: 353 VVRINVYKHHRQTIQYILPHEHEKLSQVELLVVDEAAA 390


>ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera]
           gi|296082521|emb|CBI21526.3| unnamed protein product
           [Vitis vinifera]
          Length = 1032

 Score =  119 bits (298), Expect = 3e-25
 Identities = 89/219 (40%), Positives = 103/219 (47%), Gaps = 46/219 (21%)
 Frame = +3

Query: 30  MNGSSISSHNRRSETGIVKKDSEGISGMQQDLVL*SANV-------------ARWEQGEV 170
           +N   ISSH R      VK+DSEG+S  ++DL      +                +QG+ 
Sbjct: 203 LNILPISSHIRSITAVPVKEDSEGLSEAERDLKNLKEQLNEDFPVGPLIKKCCTLDQGKA 262

Query: 171 TIELPDGILGKALRKTVPLLAGRVCGKSAALGLSIAGAVAAGPVF*LRVVLAFVQRSPLV 350
            I   D IL KALR TV  LA R  GKSAALGL++AGA+AAG                  
Sbjct: 263 VITFLDAILDKALRSTVVSLAARGRGKSAALGLAVAGAIAAG------------------ 304

Query: 351 SDHTVFCVSFLRYSNIFVTAPSPENLKALFEFVVKGLDALGYK----------------- 479
                       YSNIFVTAPSP+NLK LFEF+ KG DAL YK                 
Sbjct: 305 ------------YSNIFVTAPSPDNLKTLFEFICKGFDALEYKEHIDYDVVKSTNPEFKK 352

Query: 480 ----------------YIKLHEHEKLSQVELLAVDEAAA 548
                           YI+ HEHEKLSQVELL VDEAAA
Sbjct: 353 ATVRINIYRQHRQTIQYIQPHEHEKLSQVELLVVDEAAA 391


>ref|XP_003594384.1| N-acetyltransferase-like protein [Medicago truncatula]
           gi|355483432|gb|AES64635.1| N-acetyltransferase-like
           protein [Medicago truncatula]
          Length = 1043

 Score =  117 bits (292), Expect = 2e-24
 Identities = 91/217 (41%), Positives = 102/217 (47%), Gaps = 44/217 (20%)
 Frame = +3

Query: 30  MNGSSISSHNRRSETGIVKKDSEGISGMQQDLVL*SANV-------------ARWEQGEV 170
           +N   ISSH R      V +DSEG+S  +Q L      +                +QG+ 
Sbjct: 199 LNILPISSHIRSITPVSVNEDSEGLSKTEQGLKNLKEQLDETLHVGPLIRKCCTMDQGKA 258

Query: 171 TIELPDGILGKALRKTV-PLLAGRVCGKSAALGLSIAGAVAAGPVF*LRVVLAFVQRSPL 347
            +   D IL   LR  V  LLA R  GKSAALGLSIAGA+A G                 
Sbjct: 259 VVTFMDAILNTKLRSAVVALLAARGRGKSAALGLSIAGAIAVG----------------- 301

Query: 348 VSDHTVFCVSFLRYSNIFVTAPSPENLKALFEFVVKGLDALGY----------------- 476
           +S     C    RYSNIFVTAPSPENLK LFEFV KGL ALGY                 
Sbjct: 302 ISTENNLC----RYSNIFVTAPSPENLKTLFEFVCKGLSALGYEEFDVVKSVNPAFHKAT 357

Query: 477 -------------KYIKLHEHEKLSQVELLAVDEAAA 548
                        +YI  HEHEKLSQVELL VDEAAA
Sbjct: 358 ERINIYKHHRQTIQYILPHEHEKLSQVELLVVDEAAA 394


>ref|XP_001767476.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162681372|gb|EDQ67800.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1075

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 66/164 (40%), Positives = 76/164 (46%), Gaps = 33/164 (20%)
 Frame = +3

Query: 156 EQGEVTIELPDGILGKALRKTVPLLAGRVCGKSAALGLSIAGAVAAGPVF*LRVVLAFVQ 335
           +Q +  I   D I  K LR TV L A R  GKSAALG++IAGAVA G             
Sbjct: 258 DQAKAVITFLDAISEKTLRSTVALTAARGRGKSAALGVAIAGAVAFG------------- 304

Query: 336 RSPLVSDHTVFCVSFLRYSNIFVTAPSPENLKALFEFVVKGLDALGYK------------ 479
                            YSNIFVTAPSPENLK LFEF+ KG DA+ YK            
Sbjct: 305 -----------------YSNIFVTAPSPENLKTLFEFIFKGFDAMEYKEHIDYDLVESTN 347

Query: 480 ---------------------YIKLHEHEKLSQVELLAVDEAAA 548
                                YI+  +HEKL+Q ELL +DEAAA
Sbjct: 348 SAFNKAIVRVNIFRQHRQTIQYIQPKDHEKLAQAELLVIDEAAA 391


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