BLASTX nr result

ID: Coptis23_contig00027717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027717
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38103.3| unnamed protein product [Vitis vinifera]              184   6e-45
emb|CAN79709.1| hypothetical protein VITISV_009621 [Vitis vinifera]   184   6e-45
emb|CAN64370.1| hypothetical protein VITISV_044088 [Vitis vinifera]   176   2e-42
ref|XP_003633190.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   175   4e-42
emb|CBI24111.3| unnamed protein product [Vitis vinifera]              175   4e-42

>emb|CBI38103.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/109 (82%), Positives = 100/109 (91%), Gaps = 1/109 (0%)
 Frame = -1

Query: 326 MAQKKGS-RVSDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLA 150
           M Q+KGS RVS+D EEL  VPLQAILLADSFAQKFRPITLERPKVLLPLVN+PMIDY+LA
Sbjct: 1   MVQRKGSTRVSEDAEELVRVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLA 60

Query: 149 WLESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESHDSVSA 3
           WLESAG+EEV+VFCCAHSKQVI YL+NS W+S+P F VTTIESH+SVSA
Sbjct: 61  WLESAGIEEVFVFCCAHSKQVINYLENSHWVSLPHFEVTTIESHNSVSA 109


>emb|CAN79709.1| hypothetical protein VITISV_009621 [Vitis vinifera]
          Length = 277

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/109 (82%), Positives = 100/109 (91%), Gaps = 1/109 (0%)
 Frame = -1

Query: 326 MAQKKGS-RVSDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLA 150
           M Q+KGS RVS+D EEL  VPLQAILLADSFAQKFRPITLERPKVLLPLVN+PMIDY+LA
Sbjct: 1   MVQRKGSTRVSEDAEELVRVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLA 60

Query: 149 WLESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESHDSVSA 3
           WLESAG+EEV+VFCCAHSKQVI YL+NS W+S+P F VTTIESH+SVSA
Sbjct: 61  WLESAGIEEVFVFCCAHSKQVINYLENSHWVSLPHFEVTTIESHNSVSA 109


>emb|CAN64370.1| hypothetical protein VITISV_044088 [Vitis vinifera]
          Length = 146

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/109 (78%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
 Frame = -1

Query: 326 MAQKKGS-RVSDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLA 150
           M Q+KGS R S+D EEL HVPLQAILLADSFAQKFRPITLERPKVLLPLVN+PMIDY+LA
Sbjct: 1   MVQRKGSTRXSEDAEELVHVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLA 60

Query: 149 WLESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESHDSVSA 3
           WLES G+EE +VF C HSKQVI YL+NS W S+P F VTTIESH+SVSA
Sbjct: 61  WLESTGIEEFFVFXCVHSKQVINYLENSHWFSLPHFDVTTIESHNSVSA 109


>ref|XP_003633190.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
           eIF-2B subunit epsilon-like [Vitis vinifera]
          Length = 416

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/109 (78%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
 Frame = -1

Query: 326 MAQKKGS-RVSDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLA 150
           M  +KGS RVS+D EEL  VPLQAILLADSFAQKFRPITLERPKVLLPLVN+PMIDY+L 
Sbjct: 1   MVHRKGSTRVSEDAEELVRVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLG 60

Query: 149 WLESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESHDSVSA 3
           WLESAG+EEV+VFCCAHSKQVI YL+NS W S+  F VTTIESH+SV A
Sbjct: 61  WLESAGIEEVFVFCCAHSKQVIKYLENSHWFSLQHFEVTTIESHNSVCA 109


>emb|CBI24111.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/109 (78%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
 Frame = -1

Query: 326 MAQKKGS-RVSDDTEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYSLA 150
           M  +KGS RVS+D EEL  VPLQAILLADSFAQKFRPITLERPKVLLPLVN+PMIDY+L 
Sbjct: 18  MVHRKGSTRVSEDAEELVRVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLG 77

Query: 149 WLESAGVEEVYVFCCAHSKQVITYLQNSQWLSIPKFTVTTIESHDSVSA 3
           WLESAG+EEV+VFCCAHSKQVI YL+NS W S+  F VTTIESH+SV A
Sbjct: 78  WLESAGIEEVFVFCCAHSKQVIKYLENSHWFSLQHFEVTTIESHNSVCA 126


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