BLASTX nr result
ID: Coptis23_contig00027715
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00027715 (933 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31848.3| unnamed protein product [Vitis vinifera] 370 e-142 ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis... 370 e-142 ref|XP_004163107.1| PREDICTED: valine--tRNA ligase-like [Cucumis... 366 e-138 ref|XP_004143624.1| PREDICTED: valine--tRNA ligase-like [Cucumis... 366 e-138 ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus com... 364 e-138 >emb|CBI31848.3| unnamed protein product [Vitis vinifera] Length = 1106 Score = 370 bits (949), Expect(2) = e-142 Identities = 165/215 (76%), Positives = 197/215 (91%) Frame = +2 Query: 2 RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181 RHNLEFI+IFTDDGKINSNGG EF GMP+FKAR AV+ AL +KGL++G K+NEM L +CS Sbjct: 436 RHNLEFINIFTDDGKINSNGGPEFAGMPRFKAREAVVAALHEKGLYKGAKDNEMRLGLCS 495 Query: 182 RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361 R+ DVVEP+IKPQW+V+C+ +A EALDAV+DDEN+KIEIIPK+YAADWKRWLENI DWC+ Sbjct: 496 RTKDVVEPLIKPQWYVSCSGIANEALDAVMDDENRKIEIIPKQYAADWKRWLENIRDWCV 555 Query: 362 SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541 SRQLWWGHRIPAWYVTLEDD++KE GAY +HWVV RNEEEA++ A+ +F GK+FQ++QDP Sbjct: 556 SRQLWWGHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIEASRMFPGKNFQISQDP 615 Query: 542 DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646 DVLDTWFSSGLFPL+VLGWPD+T++LKAFYPTSVL Sbjct: 616 DVLDTWFSSGLFPLTVLGWPDDTQDLKAFYPTSVL 650 Score = 163 bits (412), Expect(2) = e-142 Identities = 76/95 (80%), Positives = 85/95 (89%) Frame = +3 Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827 DI+FFWV MVMLG+KLGGD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGISLE Sbjct: 655 DILFFWVARMVMLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLE 714 Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932 GL KRLEEGNLDPSELV K Q +FP+GIAECG Sbjct: 715 GLHKRLEEGNLDPSELVVAKEGQVKDFPNGIAECG 749 >ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera] Length = 1071 Score = 370 bits (949), Expect(2) = e-142 Identities = 165/215 (76%), Positives = 197/215 (91%) Frame = +2 Query: 2 RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181 RHNLEFI+IFTDDGKINSNGG EF GMP+FKAR AV+ AL +KGL++G K+NEM L +CS Sbjct: 401 RHNLEFINIFTDDGKINSNGGPEFAGMPRFKAREAVVAALHEKGLYKGAKDNEMRLGLCS 460 Query: 182 RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361 R+ DVVEP+IKPQW+V+C+ +A EALDAV+DDEN+KIEIIPK+YAADWKRWLENI DWC+ Sbjct: 461 RTKDVVEPLIKPQWYVSCSGIANEALDAVMDDENRKIEIIPKQYAADWKRWLENIRDWCV 520 Query: 362 SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541 SRQLWWGHRIPAWYVTLEDD++KE GAY +HWVV RNEEEA++ A+ +F GK+FQ++QDP Sbjct: 521 SRQLWWGHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIEASRMFPGKNFQISQDP 580 Query: 542 DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646 DVLDTWFSSGLFPL+VLGWPD+T++LKAFYPTSVL Sbjct: 581 DVLDTWFSSGLFPLTVLGWPDDTQDLKAFYPTSVL 615 Score = 163 bits (412), Expect(2) = e-142 Identities = 76/95 (80%), Positives = 85/95 (89%) Frame = +3 Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827 DI+FFWV MVMLG+KLGGD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGISLE Sbjct: 620 DILFFWVARMVMLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLE 679 Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932 GL KRLEEGNLDPSELV K Q +FP+GIAECG Sbjct: 680 GLHKRLEEGNLDPSELVVAKEGQVKDFPNGIAECG 714 >ref|XP_004163107.1| PREDICTED: valine--tRNA ligase-like [Cucumis sativus] Length = 1045 Score = 366 bits (939), Expect(2) = e-138 Identities = 166/215 (77%), Positives = 190/215 (88%) Frame = +2 Query: 2 RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181 RHNLEFI+IFTDDGKINSNGG EF GMP+FKAR V++AL+KKGL+RG K+NEM L +CS Sbjct: 387 RHNLEFINIFTDDGKINSNGGSEFAGMPRFKAREMVVDALQKKGLYRGAKDNEMRLGLCS 446 Query: 182 RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361 R+NDVVEPMIKPQW+VNC AK++LDA +D+E KKI+IIPK+Y+ADWKRWL+NI DWCI Sbjct: 447 RTNDVVEPMIKPQWYVNCKEPAKQSLDAAMDNECKKIDIIPKQYSADWKRWLDNIRDWCI 506 Query: 362 SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541 SRQLWWGHRIPAWY LEDDQLKEFGAYN+HWVV RNEEEA+ A ++ GK F L QDP Sbjct: 507 SRQLWWGHRIPAWYAALEDDQLKEFGAYNDHWVVARNEEEAEEEAKRIYAGKKFHLTQDP 566 Query: 542 DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646 DVLDTWFSSGLFPLSVLGWPD+TE+LKAFYPTS L Sbjct: 567 DVLDTWFSSGLFPLSVLGWPDDTEDLKAFYPTSAL 601 Score = 154 bits (388), Expect(2) = e-138 Identities = 72/95 (75%), Positives = 81/95 (85%) Frame = +3 Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827 DIIFFWV MVMLG+ LGGD+PF+ IYLHPMIRDAHG+KMSKS GNV+DP+EVINGISLE Sbjct: 606 DIIFFWVARMVMLGITLGGDVPFQTIYLHPMIRDAHGRKMSKSLGNVIDPVEVINGISLE 665 Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932 GL KRLEEGNLDP EL K Q +FP+GI+ECG Sbjct: 666 GLHKRLEEGNLDPKELAIAKEGQVKDFPNGISECG 700 >ref|XP_004143624.1| PREDICTED: valine--tRNA ligase-like [Cucumis sativus] Length = 1045 Score = 366 bits (939), Expect(2) = e-138 Identities = 166/215 (77%), Positives = 190/215 (88%) Frame = +2 Query: 2 RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181 RHNLEFI+IFTDDGKINSNGG EF GMP+FKAR V++AL+KKGL+RG K+NEM L +CS Sbjct: 387 RHNLEFINIFTDDGKINSNGGSEFAGMPRFKAREMVVDALQKKGLYRGAKDNEMRLGLCS 446 Query: 182 RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361 R+NDVVEPMIKPQW+VNC AK++LDA +D+E KKI+IIPK+Y+ADWKRWL+NI DWCI Sbjct: 447 RTNDVVEPMIKPQWYVNCKEPAKQSLDAAMDNECKKIDIIPKQYSADWKRWLDNIRDWCI 506 Query: 362 SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541 SRQLWWGHRIPAWY LEDDQLKEFGAYN+HWVV RNEEEA+ A ++ GK F L QDP Sbjct: 507 SRQLWWGHRIPAWYAALEDDQLKEFGAYNDHWVVARNEEEAEEEAKRIYAGKKFHLTQDP 566 Query: 542 DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646 DVLDTWFSSGLFPLSVLGWPD+TE+LKAFYPTS L Sbjct: 567 DVLDTWFSSGLFPLSVLGWPDDTEDLKAFYPTSAL 601 Score = 154 bits (388), Expect(2) = e-138 Identities = 72/95 (75%), Positives = 81/95 (85%) Frame = +3 Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827 DIIFFWV MVMLG+ LGGD+PF+ IYLHPMIRDAHG+KMSKS GNV+DP+EVINGISLE Sbjct: 606 DIIFFWVARMVMLGITLGGDVPFQTIYLHPMIRDAHGRKMSKSLGNVIDPVEVINGISLE 665 Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932 GL KRLEEGNLDP EL K Q +FP+GI+ECG Sbjct: 666 GLHKRLEEGNLDPKELAIAKEGQVKDFPNGISECG 700 >ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus communis] gi|223530096|gb|EEF32012.1| valyl-tRNA synthetase, putative [Ricinus communis] Length = 1065 Score = 364 bits (935), Expect(2) = e-138 Identities = 165/215 (76%), Positives = 189/215 (87%) Frame = +2 Query: 2 RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181 RHNLEFI+IFTDDGKINSNGG EF G+P+F+AR AV EAL++KGL+RG KNNEM L CS Sbjct: 396 RHNLEFINIFTDDGKINSNGGSEFTGIPRFRAREAVTEALQEKGLYRGAKNNEMRLGCCS 455 Query: 182 RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361 RSN+VVEPMIKPQWFVNC+ MAK+ALDA D EN K+E PK+Y ADWKRWLENI DWCI Sbjct: 456 RSNEVVEPMIKPQWFVNCSTMAKQALDAAFDGENPKLEFFPKQYLADWKRWLENIRDWCI 515 Query: 362 SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541 SRQLWWGHRIPAWY+TLEDD+LKEFG YN+HWVVGR+E+EA A+ F GK F+++QDP Sbjct: 516 SRQLWWGHRIPAWYITLEDDELKEFGVYNDHWVVGRDEKEALEEASLKFAGKKFEMSQDP 575 Query: 542 DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646 DVLDTWFSSGLFPLSVLGWPD+T++LK FYPTSVL Sbjct: 576 DVLDTWFSSGLFPLSVLGWPDDTDDLKTFYPTSVL 610 Score = 155 bits (391), Expect(2) = e-138 Identities = 72/95 (75%), Positives = 83/95 (87%) Frame = +3 Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827 DI+FFWV MVMLG+ L GD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGI+LE Sbjct: 615 DILFFWVARMVMLGITLRGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGINLE 674 Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932 GL KRLEEGNLDP+ELV K Q +FP+GIAECG Sbjct: 675 GLHKRLEEGNLDPNELVTAKDGQKKDFPNGIAECG 709