BLASTX nr result

ID: Coptis23_contig00027715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027715
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31848.3| unnamed protein product [Vitis vinifera]              370   e-142
ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis...   370   e-142
ref|XP_004163107.1| PREDICTED: valine--tRNA ligase-like [Cucumis...   366   e-138
ref|XP_004143624.1| PREDICTED: valine--tRNA ligase-like [Cucumis...   366   e-138
ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus com...   364   e-138

>emb|CBI31848.3| unnamed protein product [Vitis vinifera]
          Length = 1106

 Score =  370 bits (949), Expect(2) = e-142
 Identities = 165/215 (76%), Positives = 197/215 (91%)
 Frame = +2

Query: 2    RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181
            RHNLEFI+IFTDDGKINSNGG EF GMP+FKAR AV+ AL +KGL++G K+NEM L +CS
Sbjct: 436  RHNLEFINIFTDDGKINSNGGPEFAGMPRFKAREAVVAALHEKGLYKGAKDNEMRLGLCS 495

Query: 182  RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361
            R+ DVVEP+IKPQW+V+C+ +A EALDAV+DDEN+KIEIIPK+YAADWKRWLENI DWC+
Sbjct: 496  RTKDVVEPLIKPQWYVSCSGIANEALDAVMDDENRKIEIIPKQYAADWKRWLENIRDWCV 555

Query: 362  SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541
            SRQLWWGHRIPAWYVTLEDD++KE GAY +HWVV RNEEEA++ A+ +F GK+FQ++QDP
Sbjct: 556  SRQLWWGHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIEASRMFPGKNFQISQDP 615

Query: 542  DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646
            DVLDTWFSSGLFPL+VLGWPD+T++LKAFYPTSVL
Sbjct: 616  DVLDTWFSSGLFPLTVLGWPDDTQDLKAFYPTSVL 650



 Score =  163 bits (412), Expect(2) = e-142
 Identities = 76/95 (80%), Positives = 85/95 (89%)
 Frame = +3

Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827
           DI+FFWV  MVMLG+KLGGD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGISLE
Sbjct: 655 DILFFWVARMVMLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLE 714

Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932
           GL KRLEEGNLDPSELV  K  Q  +FP+GIAECG
Sbjct: 715 GLHKRLEEGNLDPSELVVAKEGQVKDFPNGIAECG 749


>ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1071

 Score =  370 bits (949), Expect(2) = e-142
 Identities = 165/215 (76%), Positives = 197/215 (91%)
 Frame = +2

Query: 2    RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181
            RHNLEFI+IFTDDGKINSNGG EF GMP+FKAR AV+ AL +KGL++G K+NEM L +CS
Sbjct: 401  RHNLEFINIFTDDGKINSNGGPEFAGMPRFKAREAVVAALHEKGLYKGAKDNEMRLGLCS 460

Query: 182  RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361
            R+ DVVEP+IKPQW+V+C+ +A EALDAV+DDEN+KIEIIPK+YAADWKRWLENI DWC+
Sbjct: 461  RTKDVVEPLIKPQWYVSCSGIANEALDAVMDDENRKIEIIPKQYAADWKRWLENIRDWCV 520

Query: 362  SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541
            SRQLWWGHRIPAWYVTLEDD++KE GAY +HWVV RNEEEA++ A+ +F GK+FQ++QDP
Sbjct: 521  SRQLWWGHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIEASRMFPGKNFQISQDP 580

Query: 542  DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646
            DVLDTWFSSGLFPL+VLGWPD+T++LKAFYPTSVL
Sbjct: 581  DVLDTWFSSGLFPLTVLGWPDDTQDLKAFYPTSVL 615



 Score =  163 bits (412), Expect(2) = e-142
 Identities = 76/95 (80%), Positives = 85/95 (89%)
 Frame = +3

Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827
           DI+FFWV  MVMLG+KLGGD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGISLE
Sbjct: 620 DILFFWVARMVMLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLE 679

Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932
           GL KRLEEGNLDPSELV  K  Q  +FP+GIAECG
Sbjct: 680 GLHKRLEEGNLDPSELVVAKEGQVKDFPNGIAECG 714


>ref|XP_004163107.1| PREDICTED: valine--tRNA ligase-like [Cucumis sativus]
          Length = 1045

 Score =  366 bits (939), Expect(2) = e-138
 Identities = 166/215 (77%), Positives = 190/215 (88%)
 Frame = +2

Query: 2    RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181
            RHNLEFI+IFTDDGKINSNGG EF GMP+FKAR  V++AL+KKGL+RG K+NEM L +CS
Sbjct: 387  RHNLEFINIFTDDGKINSNGGSEFAGMPRFKAREMVVDALQKKGLYRGAKDNEMRLGLCS 446

Query: 182  RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361
            R+NDVVEPMIKPQW+VNC   AK++LDA +D+E KKI+IIPK+Y+ADWKRWL+NI DWCI
Sbjct: 447  RTNDVVEPMIKPQWYVNCKEPAKQSLDAAMDNECKKIDIIPKQYSADWKRWLDNIRDWCI 506

Query: 362  SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541
            SRQLWWGHRIPAWY  LEDDQLKEFGAYN+HWVV RNEEEA+  A  ++ GK F L QDP
Sbjct: 507  SRQLWWGHRIPAWYAALEDDQLKEFGAYNDHWVVARNEEEAEEEAKRIYAGKKFHLTQDP 566

Query: 542  DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646
            DVLDTWFSSGLFPLSVLGWPD+TE+LKAFYPTS L
Sbjct: 567  DVLDTWFSSGLFPLSVLGWPDDTEDLKAFYPTSAL 601



 Score =  154 bits (388), Expect(2) = e-138
 Identities = 72/95 (75%), Positives = 81/95 (85%)
 Frame = +3

Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827
           DIIFFWV  MVMLG+ LGGD+PF+ IYLHPMIRDAHG+KMSKS GNV+DP+EVINGISLE
Sbjct: 606 DIIFFWVARMVMLGITLGGDVPFQTIYLHPMIRDAHGRKMSKSLGNVIDPVEVINGISLE 665

Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932
           GL KRLEEGNLDP EL   K  Q  +FP+GI+ECG
Sbjct: 666 GLHKRLEEGNLDPKELAIAKEGQVKDFPNGISECG 700


>ref|XP_004143624.1| PREDICTED: valine--tRNA ligase-like [Cucumis sativus]
          Length = 1045

 Score =  366 bits (939), Expect(2) = e-138
 Identities = 166/215 (77%), Positives = 190/215 (88%)
 Frame = +2

Query: 2    RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181
            RHNLEFI+IFTDDGKINSNGG EF GMP+FKAR  V++AL+KKGL+RG K+NEM L +CS
Sbjct: 387  RHNLEFINIFTDDGKINSNGGSEFAGMPRFKAREMVVDALQKKGLYRGAKDNEMRLGLCS 446

Query: 182  RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361
            R+NDVVEPMIKPQW+VNC   AK++LDA +D+E KKI+IIPK+Y+ADWKRWL+NI DWCI
Sbjct: 447  RTNDVVEPMIKPQWYVNCKEPAKQSLDAAMDNECKKIDIIPKQYSADWKRWLDNIRDWCI 506

Query: 362  SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541
            SRQLWWGHRIPAWY  LEDDQLKEFGAYN+HWVV RNEEEA+  A  ++ GK F L QDP
Sbjct: 507  SRQLWWGHRIPAWYAALEDDQLKEFGAYNDHWVVARNEEEAEEEAKRIYAGKKFHLTQDP 566

Query: 542  DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646
            DVLDTWFSSGLFPLSVLGWPD+TE+LKAFYPTS L
Sbjct: 567  DVLDTWFSSGLFPLSVLGWPDDTEDLKAFYPTSAL 601



 Score =  154 bits (388), Expect(2) = e-138
 Identities = 72/95 (75%), Positives = 81/95 (85%)
 Frame = +3

Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827
           DIIFFWV  MVMLG+ LGGD+PF+ IYLHPMIRDAHG+KMSKS GNV+DP+EVINGISLE
Sbjct: 606 DIIFFWVARMVMLGITLGGDVPFQTIYLHPMIRDAHGRKMSKSLGNVIDPVEVINGISLE 665

Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932
           GL KRLEEGNLDP EL   K  Q  +FP+GI+ECG
Sbjct: 666 GLHKRLEEGNLDPKELAIAKEGQVKDFPNGISECG 700


>ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus communis]
            gi|223530096|gb|EEF32012.1| valyl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 1065

 Score =  364 bits (935), Expect(2) = e-138
 Identities = 165/215 (76%), Positives = 189/215 (87%)
 Frame = +2

Query: 2    RHNLEFISIFTDDGKINSNGGYEFDGMPQFKARAAVIEALKKKGLHRGVKNNEMSLAVCS 181
            RHNLEFI+IFTDDGKINSNGG EF G+P+F+AR AV EAL++KGL+RG KNNEM L  CS
Sbjct: 396  RHNLEFINIFTDDGKINSNGGSEFTGIPRFRAREAVTEALQEKGLYRGAKNNEMRLGCCS 455

Query: 182  RSNDVVEPMIKPQWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKRWLENIWDWCI 361
            RSN+VVEPMIKPQWFVNC+ MAK+ALDA  D EN K+E  PK+Y ADWKRWLENI DWCI
Sbjct: 456  RSNEVVEPMIKPQWFVNCSTMAKQALDAAFDGENPKLEFFPKQYLADWKRWLENIRDWCI 515

Query: 362  SRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFEGKDFQLAQDP 541
            SRQLWWGHRIPAWY+TLEDD+LKEFG YN+HWVVGR+E+EA   A+  F GK F+++QDP
Sbjct: 516  SRQLWWGHRIPAWYITLEDDELKEFGVYNDHWVVGRDEKEALEEASLKFAGKKFEMSQDP 575

Query: 542  DVLDTWFSSGLFPLSVLGWPDNTEELKAFYPTSVL 646
            DVLDTWFSSGLFPLSVLGWPD+T++LK FYPTSVL
Sbjct: 576  DVLDTWFSSGLFPLSVLGWPDDTDDLKTFYPTSVL 610



 Score =  155 bits (391), Expect(2) = e-138
 Identities = 72/95 (75%), Positives = 83/95 (87%)
 Frame = +3

Query: 648 DIIFFWVTWMVMLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLE 827
           DI+FFWV  MVMLG+ L GD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGI+LE
Sbjct: 615 DILFFWVARMVMLGITLRGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGINLE 674

Query: 828 GLQKRLEEGNLDPSELVDVKREQAVEFPDGIAECG 932
           GL KRLEEGNLDP+ELV  K  Q  +FP+GIAECG
Sbjct: 675 GLHKRLEEGNLDPNELVTAKDGQKKDFPNGIAECG 709


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