BLASTX nr result

ID: Coptis23_contig00027713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027713
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307253.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002522317.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_002522321.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_002307253.1| predicted protein [Populus trichocarpa] gi|222856702|gb|EEE94249.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/78 (39%), Positives = 50/78 (64%)
 Frame = +3

Query: 6   QLDLKNARIRSSMATVFIPELEMQLETTNASIKSAKEKELEARTRIEKLGKPLELISEEI 185
           Q  L +A+ R+SM+ + I ELE QLE TNA  +S  E+E++      ++ + ++ + EE 
Sbjct: 65  QSGLASAKNRASMSNIVISELESQLEATNADTQSKMEEEIKVANMTNEITQAMDHLREEF 124

Query: 186 EGLKLETEREREARAKLK 239
           + +KLET+ ER  R+KLK
Sbjct: 125 KRIKLETDEERRERSKLK 142


>ref|XP_002522317.1| conserved hypothetical protein [Ricinus communis]
           gi|223538395|gb|EEF40001.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 414

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/78 (38%), Positives = 49/78 (62%)
 Frame = +3

Query: 6   QLDLKNARIRSSMATVFIPELEMQLETTNASIKSAKEKELEARTRIEKLGKPLELISEEI 185
           Q  L +++ R+SM+ + I ELE QLE  +  +++  E E +A+  I +L + LE   +E 
Sbjct: 57  QAGLASSKNRTSMSNIVISELESQLEAISIEVRTKVEDETKAKEMINELSQALEEKYKES 116

Query: 186 EGLKLETEREREARAKLK 239
           E +KL+ + ER AR+KLK
Sbjct: 117 EAIKLDADEERRARSKLK 134


>ref|XP_002522321.1| conserved hypothetical protein [Ricinus communis]
           gi|223538399|gb|EEF40005.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/78 (39%), Positives = 50/78 (64%)
 Frame = +3

Query: 6   QLDLKNARIRSSMATVFIPELEMQLETTNASIKSAKEKELEARTRIEKLGKPLELISEEI 185
           Q  L  ++ R S+++  I ELE+QLE+TN SIKS  E+EL+A+   +++ +  +   + +
Sbjct: 9   QSKLAISKDRISVSSALISELELQLESTNMSIKSRMEEELQAKKLTDEITEACDETCKTL 68

Query: 186 EGLKLETEREREARAKLK 239
           E +K E   ER AR+KLK
Sbjct: 69  EMIKREIYEERRARSKLK 86


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