BLASTX nr result

ID: Coptis23_contig00027712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027712
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263820.1| PREDICTED: uncharacterized protein LOC100258...    74   2e-11
dbj|BAJ88917.1| predicted protein [Hordeum vulgare subsp. vulgare]     71   1e-10
gb|ABA98984.1| expressed protein [Oryza sativa Japonica Group]         70   1e-10
gb|EAY83543.1| hypothetical protein OsI_38754 [Oryza sativa Indi...    70   1e-10
ref|XP_003579064.1| PREDICTED: uncharacterized protein LOC100841...    70   2e-10

>ref|XP_002263820.1| PREDICTED: uncharacterized protein LOC100258064 [Vitis vinifera]
           gi|297736776|emb|CBI25977.3| unnamed protein product
           [Vitis vinifera]
          Length = 91

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = +1

Query: 1   ETDPEKIQKLKDDAARGLINHIVYESEKMSGRKFSNNS 114
           ETDPEKIQKLKDDAARGLINHI+YESEKMSGRKFS  S
Sbjct: 54  ETDPEKIQKLKDDAARGLINHILYESEKMSGRKFSKKS 91


>dbj|BAJ88917.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 89

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/35 (91%), Positives = 35/35 (100%)
 Frame = +1

Query: 1   ETDPEKIQKLKDDAARGLINHIVYESEKMSGRKFS 105
           ETDPEKIQK+KDDAARGLINHI+YESEKM+GRKFS
Sbjct: 54  ETDPEKIQKMKDDAARGLINHIIYESEKMTGRKFS 88


>gb|ABA98984.1| expressed protein [Oryza sativa Japonica Group]
          Length = 89

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   ETDPEKIQKLKDDAARGLINHIVYESEKMSGRKFSN 108
           ETDPEKIQK+KDDAARGLINHI+YESEKM+GRKFS+
Sbjct: 54  ETDPEKIQKMKDDAARGLINHILYESEKMTGRKFSS 89


>gb|EAY83543.1| hypothetical protein OsI_38754 [Oryza sativa Indica Group]
           gi|125579749|gb|EAZ20895.1| hypothetical protein
           OsJ_36534 [Oryza sativa Japonica Group]
          Length = 142

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +1

Query: 1   ETDPEKIQKLKDDAARGLINHIVYESEKMSGRKFSN 108
           ETDPEKIQK+KDDAARGLINHI+YESEKM+GRKFS+
Sbjct: 107 ETDPEKIQKMKDDAARGLINHILYESEKMTGRKFSS 142


>ref|XP_003579064.1| PREDICTED: uncharacterized protein LOC100841178 [Brachypodium
           distachyon]
          Length = 89

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 1   ETDPEKIQKLKDDAARGLINHIVYESEKMSGRKFS 105
           ETDP+KIQK+KDDAARGLINHI+YESEKM+GRKFS
Sbjct: 54  ETDPDKIQKMKDDAARGLINHIIYESEKMTGRKFS 88


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