BLASTX nr result
ID: Coptis23_contig00027710
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00027710 (242 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN60121.1| hypothetical protein VITISV_038746 [Vitis vinifera] 66 3e-09 ref|XP_002264179.2| PREDICTED: uncharacterized protein LOC100250... 62 4e-08 emb|CBI23201.3| unnamed protein product [Vitis vinifera] 61 8e-08 ref|XP_002317142.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 ref|XP_003610469.1| Lysine-specific demethylase 3A-B [Medicago t... 59 3e-07 >emb|CAN60121.1| hypothetical protein VITISV_038746 [Vitis vinifera] Length = 1016 Score = 66.2 bits (160), Expect = 3e-09 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 4/72 (5%) Frame = -1 Query: 242 CDVSDAVNILTHTTEVLMTEDQCSKVEMLKQKHKAQDEREGL---CSAQKDEPVDE-TWP 75 CD+SDAVNILTHT EV++ ++Q V+ LK+KH+AQD+RE L C ++D P+ T Sbjct: 790 CDMSDAVNILTHTAEVVLDDNQRLAVKRLKKKHQAQDKRENLVPPCQQEEDLPISRITVT 849 Query: 74 EQFDGIEGTTFP 39 E D EG FP Sbjct: 850 ENEDEEEGPYFP 861 >ref|XP_002264179.2| PREDICTED: uncharacterized protein LOC100250303 [Vitis vinifera] Length = 864 Score = 62.4 bits (150), Expect = 4e-08 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%) Frame = -1 Query: 242 CDVSDAVNILTHTTEVLMTEDQCSKVEMLKQKHKAQDEREGL---CSAQKDEPVDE-TWP 75 CD+SDAVNILTHT EV++ ++Q V+ LK+KH+AQD+RE L C ++D P+ T Sbjct: 647 CDMSDAVNILTHTAEVVLDDNQRLAVKRLKKKHQAQDKRENLVPPCQQEEDLPISRITVT 706 Query: 74 EQFDGIEG 51 E D EG Sbjct: 707 ENEDEEEG 714 >emb|CBI23201.3| unnamed protein product [Vitis vinifera] Length = 646 Score = 61.2 bits (147), Expect = 8e-08 Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 3/54 (5%) Frame = -1 Query: 242 CDVSDAVNILTHTTEVLMTEDQCSKVEMLKQKHKAQDEREGL---CSAQKDEPV 90 CD+SDAVNILTHT EV++ ++Q V+ LK+KH+AQD+RE L C ++D P+ Sbjct: 433 CDMSDAVNILTHTAEVVLDDNQRLAVKRLKKKHQAQDKRENLVPPCQQEEDLPI 486 >ref|XP_002317142.1| predicted protein [Populus trichocarpa] gi|222860207|gb|EEE97754.1| predicted protein [Populus trichocarpa] Length = 700 Score = 60.5 bits (145), Expect = 1e-07 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 10/60 (16%) Frame = -1 Query: 242 CDVSDAV----------NILTHTTEVLMTEDQCSKVEMLKQKHKAQDEREGLCSAQKDEP 93 CD+SDAV NILTHT EV ++++QCS +E+LK KH+AQDE+E L + D P Sbjct: 470 CDMSDAVCLIDLTLYFVNILTHTAEVALSQEQCSAIELLKMKHRAQDEKEYLEQDKVDNP 529 >ref|XP_003610469.1| Lysine-specific demethylase 3A-B [Medicago truncatula] gi|355511524|gb|AES92666.1| Lysine-specific demethylase 3A-B [Medicago truncatula] Length = 870 Score = 59.3 bits (142), Expect = 3e-07 Identities = 27/40 (67%), Positives = 33/40 (82%) Frame = -1 Query: 242 CDVSDAVNILTHTTEVLMTEDQCSKVEMLKQKHKAQDERE 123 CD+SDAVNILTHT EVL+T+ Q S + LK+ H+AQDERE Sbjct: 612 CDMSDAVNILTHTAEVLLTDRQKSTISNLKEAHRAQDERE 651