BLASTX nr result

ID: Coptis23_contig00027710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027710
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60121.1| hypothetical protein VITISV_038746 [Vitis vinifera]    66   3e-09
ref|XP_002264179.2| PREDICTED: uncharacterized protein LOC100250...    62   4e-08
emb|CBI23201.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002317142.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_003610469.1| Lysine-specific demethylase 3A-B [Medicago t...    59   3e-07

>emb|CAN60121.1| hypothetical protein VITISV_038746 [Vitis vinifera]
          Length = 1016

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
 Frame = -1

Query: 242  CDVSDAVNILTHTTEVLMTEDQCSKVEMLKQKHKAQDEREGL---CSAQKDEPVDE-TWP 75
            CD+SDAVNILTHT EV++ ++Q   V+ LK+KH+AQD+RE L   C  ++D P+   T  
Sbjct: 790  CDMSDAVNILTHTAEVVLDDNQRLAVKRLKKKHQAQDKRENLVPPCQQEEDLPISRITVT 849

Query: 74   EQFDGIEGTTFP 39
            E  D  EG  FP
Sbjct: 850  ENEDEEEGPYFP 861


>ref|XP_002264179.2| PREDICTED: uncharacterized protein LOC100250303 [Vitis vinifera]
          Length = 864

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
 Frame = -1

Query: 242 CDVSDAVNILTHTTEVLMTEDQCSKVEMLKQKHKAQDEREGL---CSAQKDEPVDE-TWP 75
           CD+SDAVNILTHT EV++ ++Q   V+ LK+KH+AQD+RE L   C  ++D P+   T  
Sbjct: 647 CDMSDAVNILTHTAEVVLDDNQRLAVKRLKKKHQAQDKRENLVPPCQQEEDLPISRITVT 706

Query: 74  EQFDGIEG 51
           E  D  EG
Sbjct: 707 ENEDEEEG 714


>emb|CBI23201.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
 Frame = -1

Query: 242 CDVSDAVNILTHTTEVLMTEDQCSKVEMLKQKHKAQDEREGL---CSAQKDEPV 90
           CD+SDAVNILTHT EV++ ++Q   V+ LK+KH+AQD+RE L   C  ++D P+
Sbjct: 433 CDMSDAVNILTHTAEVVLDDNQRLAVKRLKKKHQAQDKRENLVPPCQQEEDLPI 486


>ref|XP_002317142.1| predicted protein [Populus trichocarpa] gi|222860207|gb|EEE97754.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 10/60 (16%)
 Frame = -1

Query: 242 CDVSDAV----------NILTHTTEVLMTEDQCSKVEMLKQKHKAQDEREGLCSAQKDEP 93
           CD+SDAV          NILTHT EV ++++QCS +E+LK KH+AQDE+E L   + D P
Sbjct: 470 CDMSDAVCLIDLTLYFVNILTHTAEVALSQEQCSAIELLKMKHRAQDEKEYLEQDKVDNP 529


>ref|XP_003610469.1| Lysine-specific demethylase 3A-B [Medicago truncatula]
           gi|355511524|gb|AES92666.1| Lysine-specific demethylase
           3A-B [Medicago truncatula]
          Length = 870

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = -1

Query: 242 CDVSDAVNILTHTTEVLMTEDQCSKVEMLKQKHKAQDERE 123
           CD+SDAVNILTHT EVL+T+ Q S +  LK+ H+AQDERE
Sbjct: 612 CDMSDAVNILTHTAEVLLTDRQKSTISNLKEAHRAQDERE 651


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