BLASTX nr result

ID: Coptis23_contig00027704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027704
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...   150   1e-34
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...   149   3e-34
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   146   1e-33
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   145   3e-33
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S...   142   2e-32

>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/135 (53%), Positives = 96/135 (71%)
 Frame = -1

Query: 405 NQTNIVLIPKCPNPASCSDFRPISLCNISYKVISKLLANRLKTIIGPCISPYQSAFVPNR 226
           N   IV+IPK  NP   + FRPISLCN+ YKVISK+L+ RLK I+   IS +QSAFVP R
Sbjct: 258 NDATIVMIPKVDNPDKVTQFRPISLCNVVYKVISKMLSFRLKQILPEIISDHQSAFVPGR 317

Query: 225 QITDNIILAHEIMHTIKHKKGKSGLMAIKLDMSKAFDKVNWNTLTTILTSLGLNHNSVNL 46
            ITDNI+LA+E +HT+K KKG+ GL A+KLDM KA+D+V W  L  I+T LG +   + L
Sbjct: 318 LITDNILLAYECIHTMKRKKGRKGLCAVKLDMHKAYDRVEWGFLEKIMTKLGFDQRWIKL 377

Query: 45  VNQCISTPQFSVILN 1
           +  C+S+ +++V  N
Sbjct: 378 IMACVSSVRYNVRFN 392


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/136 (53%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
 Frame = -1

Query: 405 NQTNIVLIPKCPNPASCSDFRPISLCNISYKVISKLLANRLKTIIGPCISPYQSAFVPNR 226
           N+T IVLIPK P P +  D RPISLCN+ YK++SK+LANRLKTI+   ISP QSAFVP R
Sbjct: 179 NETIIVLIPKVPKPENIKDLRPISLCNVLYKIVSKVLANRLKTILPEVISPTQSAFVPGR 238

Query: 225 QITDNIILAHEIMHTIKHKK-GKSGLMAIKLDMSKAFDKVNWNTLTTILTSLGLNHNSVN 49
            I+DNI++A+E+ H ++ KK GK G  AIKLDMSKA+D+V W+ L  ++  LG N   +N
Sbjct: 239 LISDNILVAYEMTHYMRSKKRGKMGYAAIKLDMSKAYDRVEWSFLRDMMLWLGFNAEWIN 298

Query: 48  LVNQCISTPQFSVILN 1
           LV  C+++  + + +N
Sbjct: 299 LVMHCVTSVSYKIKVN 314


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/143 (49%), Positives = 100/143 (69%), Gaps = 1/143 (0%)
 Frame = -1

Query: 426 GHSLKHLNQTNIVLIPKCPNPASCSDFRPISLCNISYKVISKLLANRLKTIIGPCISPYQ 247
           G+ L+  NQTNI LIPK   P     FRPISLCN+ YK+ISK++ANRLK I+   ++PYQ
Sbjct: 491 GYILQEWNQTNICLIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKPILKSIVTPYQ 550

Query: 246 SAFVPNRQITDNIILAHEIMHTIK-HKKGKSGLMAIKLDMSKAFDKVNWNTLTTILTSLG 70
           +AFVP R I+DN ++AHE+++ IK  KKG   L A+K+DM KA+DKV+W+ L  +LT +G
Sbjct: 551 NAFVPGRLISDNCLIAHEVVNLIKQRKKGTHFLAALKIDMFKAYDKVDWDFLFWLLTQMG 610

Query: 69  LNHNSVNLVNQCISTPQFSVILN 1
                   + QC++T  +S+I+N
Sbjct: 611 FPSFYRQWIMQCVTTVSYSIIVN 633


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/142 (46%), Positives = 95/142 (66%)
 Frame = -1

Query: 426 GHSLKHLNQTNIVLIPKCPNPASCSDFRPISLCNISYKVISKLLANRLKTIIGPCISPYQ 247
           G+ LK +N T + LIPK   P + + FRPISLC+  YKVISK++ NRLK  +G  I P Q
Sbjct: 494 GYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLKITLGKIIHPLQ 553

Query: 246 SAFVPNRQITDNIILAHEIMHTIKHKKGKSGLMAIKLDMSKAFDKVNWNTLTTILTSLGL 67
            AF+P R I DNI++AHE+ H+ K+K G+ G +AIKLDM KA+D++ W  + T +  +G 
Sbjct: 554 GAFIPERLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLEWKYIYTTMDKMGF 613

Query: 66  NHNSVNLVNQCISTPQFSVILN 1
           +   +  +  CIS+  FSV++N
Sbjct: 614 SPIWIEWIRSCISSASFSVLVN 635


>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
           gi|241943773|gb|EES16918.1| hypothetical protein
           SORBIDRAFT_08g007680 [Sorghum bicolor]
          Length = 649

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/136 (49%), Positives = 95/136 (69%)
 Frame = -1

Query: 408 LNQTNIVLIPKCPNPASCSDFRPISLCNISYKVISKLLANRLKTIIGPCISPYQSAFVPN 229
           +N T IVLIPK  NP   ++FRPISLCN+ YK+ SK+LA RL+  +   IS  QSAFVP 
Sbjct: 45  INHTTIVLIPKTRNPQGMTEFRPISLCNVLYKICSKVLALRLREFLDEIISEEQSAFVPG 104

Query: 228 RQITDNIILAHEIMHTIKHKKGKSGLMAIKLDMSKAFDKVNWNTLTTILTSLGLNHNSVN 49
           R ITDN+++++E +H +K +KGK+G  AIKLDM+KA+D V W  L  I+  LG +   V 
Sbjct: 105 RLITDNVLISYECIHYLKRRKGKNGACAIKLDMAKAYDPVEWEYLQGIMLKLGFHEAFVR 164

Query: 48  LVNQCISTPQFSVILN 1
           ++ +C++T  FS+ +N
Sbjct: 165 MIMKCVTTVSFSIRVN 180


Top