BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027702
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloropla...    57   2e-06
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...    57   2e-06
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...    57   2e-06
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                          56   3e-06
ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solan...    56   4e-06

>ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 2
           [Cucumis sativus]
          Length = 237

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   LDGTIYVDKLVPRTFRTVENLNLPLPNGYHKLGVR 107
           LDGT+YVDK+VPRTFRT ENL LPL  G  KLG R
Sbjct: 203 LDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 237


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   LDGTIYVDKLVPRTFRTVENLNLPLPNGYHKLGVR 107
           LDGT+YVDK+VPRTFRT ENL LPL  G  KLG R
Sbjct: 233 LDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   LDGTIYVDKLVPRTFRTVENLNLPLPNGYHKLGVR 107
           LDGT+YVDK+VPRTFRT ENL LPL  G  KLG R
Sbjct: 233 LDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 267


>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   LDGTIYVDKLVPRTFRTVENLNLPLPNGYHKLGVR 107
           LDGT+YVDK+VPRTFRT+ENL+LPL  G   LG R
Sbjct: 240 LDGTLYVDKMVPRTFRTIENLDLPLAEGCPNLGAR 274


>ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solanum lycopersicum]
           gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName:
           Full=Peptide deformylase 1A, chloroplastic; Short=PDF
           1A; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320968|gb|AAG33981.1|AF271258_1 peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 277

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +3

Query: 3   LDGTIYVDKLVPRTFRTVENLNLPLPNGYHKLGV 104
           LDGT+YVDK+ PRTFRTVENL+LPL  G  KLGV
Sbjct: 243 LDGTLYVDKMAPRTFRTVENLDLPLAAGCPKLGV 276