BLASTX nr result

ID: Coptis23_contig00027691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027691
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277121.1| PREDICTED: uncharacterized protein LOC100240...   139   4e-31
emb|CAN67638.1| hypothetical protein VITISV_044257 [Vitis vinifera]   135   6e-30
ref|NP_565136.1| uncharacterized protein [Arabidopsis thaliana] ...   106   4e-21
gb|AAK68828.1| Unknown protein [Arabidopsis thaliana]                 106   4e-21
ref|XP_004145612.1| PREDICTED: uncharacterized protein LOC101220...   102   6e-20

>ref|XP_002277121.1| PREDICTED: uncharacterized protein LOC100240987 [Vitis vinifera]
           gi|297745627|emb|CBI40792.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score =  139 bits (350), Expect = 4e-31
 Identities = 85/191 (44%), Positives = 113/191 (59%), Gaps = 7/191 (3%)
 Frame = +1

Query: 19  MGSCFST-----SSVPLLTAKVITLNGSLLEYSVSVTVSQVLKSETTQS-CFLCNSDRLY 180
           MG C S+     +S    TAK+I+L+G L EYS  VTVSQVL  E++ S CF+CNSD LY
Sbjct: 1   MGGCVSSVGSYSNSTSTATAKLISLHGELREYSAPVTVSQVLHFESSSSSCFVCNSDSLY 60

Query: 181 YNEFIQGLNPSEELQMGQIYFILSTTRLKYRLTAQDM-XXXXXXXXXXXXXXXXXXXXXX 357
           Y+++I  +N  +EL  GQIYF+LS T+L+YRLTA +M                       
Sbjct: 61  YDDYIPAMNADDELLPGQIYFLLSATKLQYRLTASEMAALAVKASIALQNHSKKAGHRRN 120

Query: 358 XXXXXXPVMEVNQRVNEERFDGVKRFDQKLXXXXXXXXXXXXKLQRSASKRAKMAIRSFR 537
                 PV+EVNQ+V E    GVK+  +K             KLQR +S+RA+MA+RSFR
Sbjct: 121 NKSRISPVLEVNQKVMEAEVGGVKKSFEK-PALGVSRHGSLRKLQRHSSRRARMAVRSFR 179

Query: 538 LRLSTIHEGTV 570
           LRL+TI+EG+V
Sbjct: 180 LRLTTIYEGSV 190


>emb|CAN67638.1| hypothetical protein VITISV_044257 [Vitis vinifera]
          Length = 191

 Score =  135 bits (340), Expect = 6e-30
 Identities = 83/191 (43%), Positives = 112/191 (58%), Gaps = 7/191 (3%)
 Frame = +1

Query: 19  MGSCFST-----SSVPLLTAKVITLNGSLLEYSVSVTVSQVLKSETTQS-CFLCNSDRLY 180
           MG C S+     +S    TAK+I+L+G L EYS  VTVSQVL  E++ S CF+CNSD LY
Sbjct: 1   MGGCVSSVGSYSNSTSTATAKLISLHGELREYSAPVTVSQVLHFESSSSSCFVCNSDSLY 60

Query: 181 YNEFIQGLNPSEELQMGQIYFILSTTRLKYRLTAQDM-XXXXXXXXXXXXXXXXXXXXXX 357
           Y+++I  +N  +EL  GQIYF+LS  +L+YRL+A +M                       
Sbjct: 61  YDDYIPAMNADDELLPGQIYFLLSAXKLQYRLSASEMAALAVKASIALQNHSKKAGHRRN 120

Query: 358 XXXXXXPVMEVNQRVNEERFDGVKRFDQKLXXXXXXXXXXXXKLQRSASKRAKMAIRSFR 537
                 PV+EVNQ+V E    GVK+  +K             KLQR +S+RA+MA+RSFR
Sbjct: 121 NKSRISPVLEVNQKVMEAEVGGVKKSFEK-PALGVSRHGSVRKLQRHSSRRARMAVRSFR 179

Query: 538 LRLSTIHEGTV 570
           LRL+TI+EG+V
Sbjct: 180 LRLTTIYEGSV 190


>ref|NP_565136.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12323985|gb|AAG51956.1|AC015450_17 unknown protein;
           83277-83927 [Arabidopsis thaliana]
           gi|21592540|gb|AAM64489.1| unknown [Arabidopsis
           thaliana] gi|23197634|gb|AAN15344.1| Unknown protein
           [Arabidopsis thaliana] gi|332197742|gb|AEE35863.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 216

 Score =  106 bits (264), Expect = 4e-21
 Identities = 76/214 (35%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
 Frame = +1

Query: 19  MGSCFSTSSVPLL----TAKVITLNGSLLEYSVSVTVSQVLKSETTQSC--------FLC 162
           MG C S +    +    TAK++T+NG L EY V V  SQVL+SE+T S         FLC
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 163 NSDRLYYNEFIQGLNPSEELQMGQIYFILSTTRLKYRLTAQDMXXXXXXXXXXXXXXXXX 342
           NSD LYY++FI  +   E LQ  QIYF+L  ++ +YRL+A DM                 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGK 120

Query: 343 XXXXXXXXXXXPVMEVNQRVNEERFDGV-------------------KRFDQKLXXXXXX 465
                      PV+ +NQ  N+ R   V                    R           
Sbjct: 121 KNRRRRSGRISPVVTLNQ-ANDNRIAAVNNRIGGEATNMMMQKGKLPNRTTPFKDTNGYS 179

Query: 466 XXXXXXKLQRSASKRAKMAIRSFRLRLSTIHEGT 567
                 KL+R  S RAK+A+RSFRLRLSTI+EG+
Sbjct: 180 RSGSVRKLKRYTSGRAKLAVRSFRLRLSTIYEGS 213


>gb|AAK68828.1| Unknown protein [Arabidopsis thaliana]
          Length = 216

 Score =  106 bits (264), Expect = 4e-21
 Identities = 77/214 (35%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
 Frame = +1

Query: 19  MGSCFSTSSVPLL----TAKVITLNGSLLEYSVSVTVSQVLKSETTQSC--------FLC 162
           MG C S +    +    TAK++T+NG L EY V V  SQVL+SE+T S         FLC
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 163 NSDRLYYNEFIQGLNPSEELQMGQIYFILSTTRLKYRLTAQDMXXXXXXXXXXXXXXXXX 342
           NSD LYY++FI  +   E LQ  QIYF+L  ++ +YRL+A DM                 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVXASVAIEKAAGK 120

Query: 343 XXXXXXXXXXXPVMEVNQRVNEERFDGV-------------------KRFDQKLXXXXXX 465
                      PV+ +NQ  N+ R   V                    R           
Sbjct: 121 KNRRRRSGRISPVVTLNQ-ANDNRIAAVNNRIGGEATNMMMQKGKLPNRTTPFKDTNGYS 179

Query: 466 XXXXXXKLQRSASKRAKMAIRSFRLRLSTIHEGT 567
                 KL+R  S RAK+A+RSFRLRLSTI+EG+
Sbjct: 180 RSGSVRKLKRYTSGRAKLAVRSFRLRLSTIYEGS 213


>ref|XP_004145612.1| PREDICTED: uncharacterized protein LOC101220453 [Cucumis sativus]
           gi|449485238|ref|XP_004157109.1| PREDICTED:
           uncharacterized protein LOC101223391 [Cucumis sativus]
          Length = 217

 Score =  102 bits (254), Expect = 6e-20
 Identities = 70/182 (38%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
 Frame = +1

Query: 58  TAKVITLNGSLLEYSVSVTVSQVLKSE----TTQSCFLCNSDRLYYNEFIQGLNPSEELQ 225
           TAKVI+L G L EY V ++VS+VL++E    +T   FLCNSDRL+Y++FI  L    +L 
Sbjct: 37  TAKVISLQGHLREYPVPISVSRVLQTENSSSSTSDSFLCNSDRLFYDDFIPSLPLDHQLH 96

Query: 226 MGQIYFILSTTRLKYRLTAQDM----XXXXXXXXXXXXXXXXXXXXXXXXXXXXPVMEV- 390
             QIYFIL ++ L +RLTA DM                                P+ ++ 
Sbjct: 97  PNQIYFILPSSNLHHRLTAPDMAALAVKATLALQNASTNNLHLPHNKGRRRRISPLFDLD 156

Query: 391 --NQRVNEERFDGVKRFDQKLXXXXXXXXXXXXKLQRSASKRAKMAIRSFRLRLSTIHEG 564
             N + NE   +                     KLQR  S+RAKMA+RSF+LRLSTI+EG
Sbjct: 157 SPNDQQNEHEHE--HALSTNSNSKNNTTSSSVKKLQRLTSRRAKMAVRSFKLRLSTIYEG 214

Query: 565 TV 570
           TV
Sbjct: 215 TV 216


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