BLASTX nr result

ID: Coptis23_contig00027665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027665
         (1272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528335.1| Vesicle transport protein SEC20, putative [R...   289   9e-76
ref|XP_003632010.1| PREDICTED: uncharacterized protein LOC100245...   280   6e-73
ref|NP_001239735.1| uncharacterized protein LOC100795925 [Glycin...   272   2e-70
ref|XP_003535033.1| PREDICTED: uncharacterized protein LOC100812...   269   1e-69
ref|XP_003594439.1| hypothetical protein MTR_2g028660 [Medicago ...   265   1e-68

>ref|XP_002528335.1| Vesicle transport protein SEC20, putative [Ricinus communis]
            gi|223532203|gb|EEF34007.1| Vesicle transport protein
            SEC20, putative [Ricinus communis]
          Length = 299

 Score =  289 bits (740), Expect = 9e-76
 Identities = 160/250 (64%), Positives = 179/250 (71%), Gaps = 5/250 (2%)
 Frame = -3

Query: 1069 NSLQRLNGLAQDGXXXXXXXXXXXXXXAPQMPTQEDVQSAQLLFKSWKDQYQSLHLGLRN 890
            NSL RLNGLAQDG              APQ+PT EDV SAQ L +SWK Q+Q+L L LRN
Sbjct: 50   NSLPRLNGLAQDGLAVLKSLQFKLDLLAPQLPTHEDVNSAQSLLESWKTQFQNLRLSLRN 109

Query: 889  ANLQAKANIRKAAQAEREXXXXXXGESTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQ 710
            ANLQAKAN+RKAAQ +RE       ESTIRRRNLQTKAGMTSAAESIT+SLRR+RQLMVQ
Sbjct: 110  ANLQAKANMRKAAQEQRELLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRSRQLMVQ 169

Query: 709  EVERSSSMLTTFDESTGVLKKAESEYKGHXXXXXXXXXXXXXXXRQDVLDRLIIVAGFLF 530
            EVERS+S L TF+ESTGVL+KAESEYKGH               RQDVLDR+I+  GF  
Sbjct: 170  EVERSASSLVTFEESTGVLRKAESEYKGHRSLLTRTRNLLSTMQRQDVLDRMILAVGFFL 229

Query: 529  FSCAVLYVVTKRIGLLKLQRQVTAAIKAGMIGHGEVRPGAIEDGFNQIQVNNRLVPNVE- 353
            FSCAVLYVV+KRIGLLKLQRQVTA +KAGM G G++ P  + DG    QV +  VP VE 
Sbjct: 230  FSCAVLYVVSKRIGLLKLQRQVTAILKAGMAGQGKIIPQGVGDGVGFAQVYDNAVPQVEI 289

Query: 352  ----NMHDEL 335
                NMHDEL
Sbjct: 290  PLEQNMHDEL 299


>ref|XP_003632010.1| PREDICTED: uncharacterized protein LOC100245990 [Vitis vinifera]
            gi|296083741|emb|CBI23730.3| unnamed protein product
            [Vitis vinifera]
          Length = 289

 Score =  280 bits (716), Expect = 6e-73
 Identities = 160/273 (58%), Positives = 186/273 (68%), Gaps = 5/273 (1%)
 Frame = -3

Query: 1138 TYAQTQTRVKSIXXXXXXXXXXGNSLQRLNGLAQDGXXXXXXXXXXXXXXAPQMPTQEDV 959
            TY +T   +K+I           NSL RLNGLAQDG              APQ+PT ED+
Sbjct: 18   TYGKTLDHIKAIEDYGKSSDQK-NSLPRLNGLAQDGLALLSSLQFNLDLLAPQLPTDEDI 76

Query: 958  QSAQLLFKSWKDQYQSLHLGLRNANLQAKANIRKAAQAEREXXXXXXGESTIRRRNLQTK 779
            QSA    +SWK+Q QSL   LRNANLQAKAN+RKAA+ ERE      GESTIRRRNLQTK
Sbjct: 77   QSANTTLQSWKNQIQSLRSSLRNANLQAKANMRKAAKEERELLLGAGGESTIRRRNLQTK 136

Query: 778  AGMTSAAESITDSLRRTRQLMVQEVERSSSMLTTFDESTGVLKKAESEYKGHXXXXXXXX 599
             GMTSAAE+IT+SLRRTRQLMVQEVER+++ML T +ESTGVLKKAESEYKGH        
Sbjct: 137  TGMTSAAENITESLRRTRQLMVQEVERNTTMLLTNEESTGVLKKAESEYKGHRSLLMRTR 196

Query: 598  XXXXXXXRQDVLDRLIIVAGFLFFSCAVLYVVTKRIGLLKLQRQVTAAIKAGMIGHGEVR 419
                   RQDVLDR+I++ GF+FFSCAVLYVV+KRIGLLKLQR VTAAIKAGM+    + 
Sbjct: 197  NLLTTMQRQDVLDRIILIVGFVFFSCAVLYVVSKRIGLLKLQRTVTAAIKAGMVRQANIG 256

Query: 418  PGAIEDGFNQIQVNNRLVPNVE-----NMHDEL 335
              A EDG N   V++  +  VE     +MHDEL
Sbjct: 257  QDAAEDGINLAPVHDNAIRRVEVPLEQHMHDEL 289


>ref|NP_001239735.1| uncharacterized protein LOC100795925 [Glycine max]
            gi|255645756|gb|ACU23371.1| unknown [Glycine max]
          Length = 292

 Score =  272 bits (695), Expect = 2e-70
 Identities = 158/275 (57%), Positives = 182/275 (66%), Gaps = 7/275 (2%)
 Frame = -3

Query: 1138 TYAQTQTRVKSIXXXXXXXXXXG--NSLQRLNGLAQDGXXXXXXXXXXXXXXAPQMPTQE 965
            TY +TQ  +++I             NSL RLNG+AQDG              APQ+P++ 
Sbjct: 18   TYKKTQEHIEAIAEYGKPGRAKEEKNSLARLNGIAQDGLALLSSFLFTLDLLAPQLPSEP 77

Query: 964  DVQSAQLLFKSWKDQYQSLHLGLRNANLQAKANIRKAAQAEREXXXXXXGESTIRRRNLQ 785
            +VQS + L +SWK   Q+L L LRNANLQAKAN+RKAAQ ERE       EST+RRRNLQ
Sbjct: 78   EVQSTRALLQSWKTLTQNLRLNLRNANLQAKANLRKAAQEERELLLGGGEESTVRRRNLQ 137

Query: 784  TKAGMTSAAESITDSLRRTRQLMVQEVERSSSMLTTFDESTGVLKKAESEYKGHXXXXXX 605
            TKAGMTSAAESIT+SLRRTRQLMVQEVER++S L T DESTGVLKKAESEYKGH      
Sbjct: 138  TKAGMTSAAESITESLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAESEYKGHRSLLMR 197

Query: 604  XXXXXXXXXRQDVLDRLIIVAGFLFFSCAVLYVVTKRIGLLKLQRQVTAAIKAGMIGHGE 425
                     RQDV+DR+II  GFL FS AVLYVV KRIGLL LQR+VT AIKAGM+G  E
Sbjct: 198  TRNLLSTMQRQDVIDRVIIGVGFLLFSLAVLYVVYKRIGLLTLQRKVTEAIKAGMVGQAE 257

Query: 424  VRPGAIEDGFNQIQVNNRLVPNVE-----NMHDEL 335
            +RP A+ D  N  QV    V N E      +HDEL
Sbjct: 258  LRPQAVADDLNLHQVRGDCVHNAEAPLEQRIHDEL 292


>ref|XP_003535033.1| PREDICTED: uncharacterized protein LOC100812474 [Glycine max]
          Length = 293

 Score =  269 bits (687), Expect = 1e-69
 Identities = 157/276 (56%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
 Frame = -3

Query: 1138 TYAQTQTRVKSIXXXXXXXXXXG--NSLQRLNGLAQDGXXXXXXXXXXXXXXAPQMPTQE 965
            TY +TQ  +++I             NSL RLNG+AQDG              APQ+P++ 
Sbjct: 18   TYKKTQEHIEAIADYGKSARAKEENNSLARLNGIAQDGLALLSSFLFTLDLLAPQLPSEP 77

Query: 964  DVQSAQLLFKSWKDQYQSLHLGLRNANLQAKANIRKAAQAEREXXXXXXGESTIRRRNLQ 785
            +VQS + L +S K   Q+L L LRNANLQAKAN+RKAAQ ERE       EST+RRRNLQ
Sbjct: 78   EVQSTRALLQSSKTLTQNLRLNLRNANLQAKANLRKAAQEERELLLGGGEESTVRRRNLQ 137

Query: 784  TKAGMTSAAESITDSLRRTRQLMVQEVERSSSMLTTFDESTGVLKKAESEYKGHXXXXXX 605
            TKAGMTSAAESIT+SLRRTRQLMVQEVER++S L T DESTGVLKKAESEYKGH      
Sbjct: 138  TKAGMTSAAESITESLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAESEYKGHRSLLMR 197

Query: 604  XXXXXXXXXRQDVLDRLIIVAGFLFFSCAVLYVVTKRIGLLKLQRQVTAAIKAGMIGHGE 425
                     RQDV+DR+II  GFL FS AVLYVV+KRIGLL LQR+VT AIKAGM+G  E
Sbjct: 198  TRNLLSTMQRQDVIDRVIIGVGFLLFSLAVLYVVSKRIGLLTLQRKVTEAIKAGMVGQAE 257

Query: 424  VRPGAIEDGFNQIQVNNRLVPN------VENMHDEL 335
            +RP A+ D  N  QV    VPN       + +HDEL
Sbjct: 258  LRPQAVADDVNLHQVRGNRVPNNAEAPLEQRIHDEL 293


>ref|XP_003594439.1| hypothetical protein MTR_2g028660 [Medicago truncatula]
            gi|355483487|gb|AES64690.1| hypothetical protein
            MTR_2g028660 [Medicago truncatula]
          Length = 292

 Score =  265 bits (678), Expect = 1e-68
 Identities = 148/250 (59%), Positives = 175/250 (70%), Gaps = 5/250 (2%)
 Frame = -3

Query: 1069 NSLQRLNGLAQDGXXXXXXXXXXXXXXAPQMPTQEDVQSAQLLFKSWKDQYQSLHLGLRN 890
            NSL RLNG+AQDG              APQ+PTQ++V SA+ L +SWK   Q+L + LRN
Sbjct: 43   NSLARLNGIAQDGLALLSSLHFNLDLLAPQLPTQQEVDSARQLLQSWKTLTQNLRISLRN 102

Query: 889  ANLQAKANIRKAAQAEREXXXXXXGESTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQ 710
            ANLQAKAN+RKAAQ ERE       EST+RRRNLQTKAGMTSAAESIT+SLRRTRQLMVQ
Sbjct: 103  ANLQAKANLRKAAQEERELLLGGGEESTVRRRNLQTKAGMTSAAESITESLRRTRQLMVQ 162

Query: 709  EVERSSSMLTTFDESTGVLKKAESEYKGHXXXXXXXXXXXXXXXRQDVLDRLIIVAGFLF 530
            EVER++S L T DESTGVLKKAESEYKGH               RQD++DR+I+  GFL 
Sbjct: 163  EVERNTSTLMTLDESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDIIDRVILGVGFLL 222

Query: 529  FSCAVLYVVTKRIGLLKLQRQVTAAIKAGMIGHGEVRPGAIEDGFNQIQ-----VNNRLV 365
            FS AVLYVV+KRIG+L LQR+VT AIKAGM+G   +RP A+ +  N  Q     V+N   
Sbjct: 223  FSLAVLYVVSKRIGILTLQRKVTGAIKAGMMGQAGLRPQAVAENMNPHQARVDRVHNIEA 282

Query: 364  PNVENMHDEL 335
            P  + +HDEL
Sbjct: 283  PLEQQIHDEL 292


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