BLASTX nr result

ID: Coptis23_contig00027663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027663
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565600.1| PREDICTED: zinc finger CCCH domain-containin...    67   2e-09
gb|AFW79666.1| putative RNA helicase family protein [Zea mays]         65   8e-09
gb|AFW79665.1| putative RNA helicase family protein [Zea mays]         65   8e-09
gb|AFW79664.1| putative RNA helicase family protein [Zea mays]         65   8e-09
dbj|BAJ85789.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   8e-09

>ref|XP_003565600.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like
           [Brachypodium distachyon]
          Length = 1004

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = +1

Query: 466 VILATNIAESSVTIPGVAFVIDSCRSLQVYSDSIRK 573
           VILATNIAESSVTIPGVA+VIDSCRSLQVY DSIRK
Sbjct: 317 VILATNIAESSVTIPGVAYVIDSCRSLQVYWDSIRK 352


>gb|AFW79666.1| putative RNA helicase family protein [Zea mays]
          Length = 764

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +1

Query: 466 VILATNIAESSVTIPGVAFVIDSCRSLQVYSDSIRK 573
           VILATNIAESSVTIPGVA+VIDSCRSLQVY D IRK
Sbjct: 323 VILATNIAESSVTIPGVAYVIDSCRSLQVYWDPIRK 358


>gb|AFW79665.1| putative RNA helicase family protein [Zea mays]
          Length = 1007

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +1

Query: 466 VILATNIAESSVTIPGVAFVIDSCRSLQVYSDSIRK 573
           VILATNIAESSVTIPGVA+VIDSCRSLQVY D IRK
Sbjct: 323 VILATNIAESSVTIPGVAYVIDSCRSLQVYWDPIRK 358


>gb|AFW79664.1| putative RNA helicase family protein [Zea mays]
          Length = 981

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +1

Query: 466 VILATNIAESSVTIPGVAFVIDSCRSLQVYSDSIRK 573
           VILATNIAESSVTIPGVA+VIDSCRSLQVY D IRK
Sbjct: 323 VILATNIAESSVTIPGVAYVIDSCRSLQVYWDPIRK 358


>dbj|BAJ85789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 849

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +1

Query: 466 VILATNIAESSVTIPGVAFVIDSCRSLQVYSDSIRK 573
           VILATNIAESSVTIPGVA+VIDSCRSLQVY D IRK
Sbjct: 160 VILATNIAESSVTIPGVAYVIDSCRSLQVYWDPIRK 195


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