BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027647
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             207   6e-52
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   203   1e-50
emb|CAN62151.1| hypothetical protein VITISV_032403 [Vitis vinifera]   199   2e-49
ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854...   198   4e-49
emb|CAN82687.1| hypothetical protein VITISV_006267 [Vitis vinifera]   197   6e-49

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  207 bits (528), Expect = 6e-52
 Identities = 97/140 (69%), Positives = 116/140 (82%)
 Frame = -3

Query: 420 INDEIDNLKKVGFIREVEYPEWVANIVAVLKKNGTVCLCVDFTNANQNTPKDSFPLPRID 241
           +NDE+D L K+G IREV+YPEWVAN V V KKNG   +C+DFT+ N+  PKDSFPLP ID
Sbjct: 37  VNDEVDKLLKIGSIREVQYPEWVANTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHID 96

Query: 240 QLVDQTAGNELMSFMDAYSGYNQIPLAEEDQEKTSFVTEQGIYCYNVLPFGLKNAGATYQ 61
           +LV+ TAGNEL++FMDA+SG NQI +  EDQEKTSF+T++GIYCY V+PFGLKNAGATYQ
Sbjct: 97  RLVESTAGNELLTFMDAFSGSNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQ 156

Query: 60  RLVTDMFQDMLGDTMEVYID 1
           RLV  MF + LG TMEVYID
Sbjct: 157 RLVNKMFHNHLGKTMEVYID 176


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  203 bits (517), Expect = 1e-50
 Identities = 93/140 (66%), Positives = 115/140 (82%)
 Frame = -3

Query: 420 INDEIDNLKKVGFIREVEYPEWVANIVAVLKKNGTVCLCVDFTNANQNTPKDSFPLPRID 241
           +NDE+D L K+G IREV+YP+W+AN V V KKNG   +C+DFT+ N+  PKDSFPLP ID
Sbjct: 480 VNDEVDKLLKIGSIREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHID 539

Query: 240 QLVDQTAGNELMSFMDAYSGYNQIPLAEEDQEKTSFVTEQGIYCYNVLPFGLKNAGATYQ 61
           +LV+ TAGNEL+SFMDA+SGYNQI +  EDQEKT F+T++GIYCY V+PFGL+NAGATY 
Sbjct: 540 RLVESTAGNELLSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPFGLRNAGATYP 599

Query: 60  RLVTDMFQDMLGDTMEVYID 1
           RLV  MF + +G TMEVYID
Sbjct: 600 RLVNKMFSEHVGKTMEVYID 619


>emb|CAN62151.1| hypothetical protein VITISV_032403 [Vitis vinifera]
          Length = 835

 Score =  199 bits (507), Expect = 2e-49
 Identities = 90/140 (64%), Positives = 116/140 (82%)
 Frame = -3

Query: 420 INDEIDNLKKVGFIREVEYPEWVANIVAVLKKNGTVCLCVDFTNANQNTPKDSFPLPRID 241
           I DE++   +VGFIREVEYPEW+AN V V KK G   +CVD+TN N    KDSFPLPRID
Sbjct: 37  IQDEMEKFLEVGFIREVEYPEWLANAVVVPKKGGKWRVCVDYTNLNNACSKDSFPLPRID 96

Query: 240 QLVDQTAGNELMSFMDAYSGYNQIPLAEEDQEKTSFVTEQGIYCYNVLPFGLKNAGATYQ 61
           Q+VD TAG+E++SF+DA+SGY+QIP+A ED+EKT+F+T  G+YCY V+PFGLKNAGATYQ
Sbjct: 97  QIVDATAGHEVLSFLDAFSGYHQIPMAPEDEEKTTFITPHGLYCYKVMPFGLKNAGATYQ 156

Query: 60  RLVTDMFQDMLGDTMEVYID 1
           +L+T +F+ ++GD +EVYID
Sbjct: 157 KLMTKIFKPLIGDIIEVYID 176


>ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854367 [Vitis vinifera]
          Length = 955

 Score =  198 bits (503), Expect = 4e-49
 Identities = 89/140 (63%), Positives = 115/140 (82%)
 Frame = -3

Query: 420  INDEIDNLKKVGFIREVEYPEWVANIVAVLKKNGTVCLCVDFTNANQNTPKDSFPLPRID 241
            I DE++   + GFIREVEYPEW+AN V V KK G   +CVD+TN N    KDSFPLPRID
Sbjct: 605  IQDEMEKFLEAGFIREVEYPEWLANAVVVPKKGGKWRVCVDYTNLNNACSKDSFPLPRID 664

Query: 240  QLVDQTAGNELMSFMDAYSGYNQIPLAEEDQEKTSFVTEQGIYCYNVLPFGLKNAGATYQ 61
            Q+VD TAG+E++SF+DA+SGY+QIP+A ED+EKT+F+T  G+YCY V+PFGLKNAGATYQ
Sbjct: 665  QIVDATAGHEVLSFLDAFSGYHQIPMAPEDEEKTTFITPHGLYCYKVMPFGLKNAGATYQ 724

Query: 60   RLVTDMFQDMLGDTMEVYID 1
            +L+T +F+ ++GD +EVYID
Sbjct: 725  KLMTKIFKPLIGDIIEVYID 744


>emb|CAN82687.1| hypothetical protein VITISV_006267 [Vitis vinifera]
          Length = 969

 Score =  197 bits (502), Expect = 6e-49
 Identities = 88/140 (62%), Positives = 116/140 (82%)
 Frame = -3

Query: 420 INDEIDNLKKVGFIREVEYPEWVANIVAVLKKNGTVCLCVDFTNANQNTPKDSFPLPRID 241
           I DEI+ L +VGFIREV YPEW+AN+V V KK G   +CVD+TN N   PKDSFPLPRID
Sbjct: 37  IQDEINKLLEVGFIREVSYPEWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRID 96

Query: 240 QLVDQTAGNELMSFMDAYSGYNQIPLAEEDQEKTSFVTEQGIYCYNVLPFGLKNAGATYQ 61
           Q+VD T+G  ++SF+DA+SGY+QIP++ +D+EKT+F+T  G+YCY V+PFGLKNAGATYQ
Sbjct: 97  QIVDSTSGQGMLSFLDAFSGYHQIPMSPDDEEKTAFITPHGLYCYKVMPFGLKNAGATYQ 156

Query: 60  RLVTDMFQDMLGDTMEVYID 1
           RL+T +F+ ++G ++EVYID
Sbjct: 157 RLMTKIFKPLIGRSVEVYID 176