BLASTX nr result

ID: Coptis23_contig00027637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027637
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogen...    73   5e-13
gb|ACF87156.1| unknown [Zea mays] gi|413926408|gb|AFW66340.1| su...    68   9e-13
gb|ABY28388.1| aldehyde dehydrogenase [Saccharum officinarum]          68   9e-13
gb|AFW70319.1| succinate semialdehyde dehydrogenase [Zea mays]         68   1e-12
ref|NP_001147173.1| succinate semialdehyde dehydrogenase [Zea ma...    68   1e-12

>ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
           [Glycine max]
          Length = 537

 Score = 73.2 bits (178), Expect(2) = 5e-13
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = +2

Query: 182 IPTLVAPFGGFKQSDLGREGSKYGLDEYLEVKYLCFGNI 298
           I T VAPFGGFKQS LGREGSKYG+DEYLE+KY+CFGN+
Sbjct: 496 ISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCFGNM 534



 Score = 27.7 bits (60), Expect(2) = 5e-13
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 151 TEEEAIHMAKDTNAG 195
           TEEEAI +A DTNAG
Sbjct: 450 TEEEAIRIANDTNAG 464


>gb|ACF87156.1| unknown [Zea mays] gi|413926408|gb|AFW66340.1| succinate
           semialdehyde dehydrogenase [Zea mays]
          Length = 527

 Score = 68.2 bits (165), Expect(2) = 9e-13
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = +2

Query: 182 IPTLVAPFGGFKQSDLGREGSKYGLDEYLEVKYLCFGNI 298
           I T VAPFGG KQS LGREGSKYG+DEYLE+KY+C GN+
Sbjct: 488 ISTEVAPFGGVKQSGLGREGSKYGIDEYLELKYICMGNL 526



 Score = 32.0 bits (71), Expect(2) = 9e-13
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 151 TEEEAIHMAKDTNAG 195
           TEEEA+HMA DTNAG
Sbjct: 442 TEEEAVHMANDTNAG 456


>gb|ABY28388.1| aldehyde dehydrogenase [Saccharum officinarum]
          Length = 527

 Score = 68.2 bits (165), Expect(2) = 9e-13
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = +2

Query: 182 IPTLVAPFGGFKQSDLGREGSKYGLDEYLEVKYLCFGNI 298
           I T VAPFGG KQS LGREGSKYG+DEYLE+KY+C GN+
Sbjct: 488 ISTEVAPFGGVKQSGLGREGSKYGIDEYLELKYICMGNL 526



 Score = 32.0 bits (71), Expect(2) = 9e-13
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 151 TEEEAIHMAKDTNAG 195
           TEEEA+HMA DTNAG
Sbjct: 442 TEEEAVHMANDTNAG 456


>gb|AFW70319.1| succinate semialdehyde dehydrogenase [Zea mays]
          Length = 521

 Score = 67.8 bits (164), Expect(2) = 1e-12
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = +2

Query: 182 IPTLVAPFGGFKQSDLGREGSKYGLDEYLEVKYLCFGNI 298
           I T VAPFGG KQS LGREGSKYG+DEYLE+KY+C GN+
Sbjct: 482 ISTEVAPFGGVKQSGLGREGSKYGVDEYLELKYICMGNL 520



 Score = 32.0 bits (71), Expect(2) = 1e-12
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 151 TEEEAIHMAKDTNAG 195
           TEEEA+HMA DTNAG
Sbjct: 436 TEEEAVHMANDTNAG 450


>ref|NP_001147173.1| succinate semialdehyde dehydrogenase [Zea mays]
           gi|195607992|gb|ACG25826.1| succinate semialdehyde
           dehydrogenase [Zea mays] gi|413935769|gb|AFW70320.1|
           succinate semialdehyde dehydrogenase [Zea mays]
          Length = 493

 Score = 67.8 bits (164), Expect(2) = 1e-12
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = +2

Query: 182 IPTLVAPFGGFKQSDLGREGSKYGLDEYLEVKYLCFGNI 298
           I T VAPFGG KQS LGREGSKYG+DEYLE+KY+C GN+
Sbjct: 454 ISTEVAPFGGVKQSGLGREGSKYGVDEYLELKYICMGNL 492



 Score = 32.0 bits (71), Expect(2) = 1e-12
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 151 TEEEAIHMAKDTNAG 195
           TEEEA+HMA DTNAG
Sbjct: 408 TEEEAVHMANDTNAG 422


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