BLASTX nr result

ID: Coptis23_contig00027619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027619
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]    84   1e-31
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...    84   1e-31
emb|CBI40561.3| unnamed protein product [Vitis vinifera]               82   3e-31
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247...    81   3e-30
ref|XP_002321404.1| predicted protein [Populus trichocarpa] gi|2...    74   7e-21

>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score = 83.6 bits (205), Expect(2) = 1e-31
 Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 12/97 (12%)
 Frame = +1

Query: 406 KGRSPAWGNEAYSYQRQYVEHAHSQ--DTKASG----KRSGWEGEGSLT------DVVGQ 549
           +GR P  G+EA +  +Q+VE AH Q  D K+      KR+G   E  L       DV  Q
Sbjct: 345 EGRQPG-GSEAETSHQQFVERAHGQVADGKSKATTKRKRNGRVSEVELAADDSKADVSNQ 403

Query: 550 FPDWRTNIDCSIPCPPIESGGCGSKILELRRSLKANW 660
           FPDWR   D SIPCPP E GGCG+ ILELRR+ KANW
Sbjct: 404 FPDWRATGDGSIPCPPKERGGCGTAILELRRNFKANW 440



 Score = 79.3 bits (194), Expect(2) = 1e-31
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +2

Query: 314 DNCNTSIFNFHRSCPNPDCSYDLCLTCCLELREGRQLG 427
           DNCNTSI +FHRSCPNPDCSYDLCL CC ELREGRQ G
Sbjct: 313 DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPG 350


>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score = 83.6 bits (205), Expect(2) = 1e-31
 Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 12/97 (12%)
 Frame = +1

Query: 406 KGRSPAWGNEAYSYQRQYVEHAHSQ--DTKASG----KRSGWEGEGSLT------DVVGQ 549
           +GR P  G+EA +  +Q+VE AH Q  D K+      KR+G   E  L       DV  Q
Sbjct: 345 EGRQPG-GSEAETSHQQFVERAHGQVADGKSKATTKRKRNGRVSEVELAADDSKADVSNQ 403

Query: 550 FPDWRTNIDCSIPCPPIESGGCGSKILELRRSLKANW 660
           FPDWR   D SIPCPP E GGCG+ ILELRR+ KANW
Sbjct: 404 FPDWRATGDGSIPCPPKERGGCGTAILELRRNFKANW 440



 Score = 79.3 bits (194), Expect(2) = 1e-31
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +2

Query: 314 DNCNTSIFNFHRSCPNPDCSYDLCLTCCLELREGRQLG 427
           DNCNTSI +FHRSCPNPDCSYDLCL CC ELREGRQ G
Sbjct: 313 DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPG 350


>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score = 82.0 bits (201), Expect(2) = 3e-31
 Identities = 43/85 (50%), Positives = 51/85 (60%)
 Frame = +1

Query: 406 KGRSPAWGNEAYSYQRQYVEHAHSQDTKASGKRSGWEGEGSLTDVVGQFPDWRTNIDCSI 585
           +GR P  G+EA +  +Q+VE AH Q             + S  DV  QFPDWR   D SI
Sbjct: 321 EGRQPG-GSEAETSHQQFVERAHGQ----------LAADDSKADVSNQFPDWRATGDGSI 369

Query: 586 PCPPIESGGCGSKILELRRSLKANW 660
           PCPP E GGCG+ ILELRR+ KANW
Sbjct: 370 PCPPKERGGCGTAILELRRNFKANW 394



 Score = 79.3 bits (194), Expect(2) = 3e-31
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +2

Query: 314 DNCNTSIFNFHRSCPNPDCSYDLCLTCCLELREGRQLG 427
           DNCNTSI +FHRSCPNPDCSYDLCL CC ELREGRQ G
Sbjct: 289 DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPG 326


>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
          Length = 1876

 Score = 80.9 bits (198), Expect(2) = 3e-30
 Identities = 44/97 (45%), Positives = 55/97 (56%), Gaps = 12/97 (12%)
 Frame = +1

Query: 406  KGRSPAWGNEAYSYQRQYVEHAHSQDTKASGK------RSGWEGEGS------LTDVVGQ 549
            KG  P  GNEA S  +Q+VE  + Q T+  G+      R GWE +G+        D    
Sbjct: 1237 KGLQPG-GNEAESSHQQFVERVNGQGTEVKGRIPAHDERYGWESDGAHPTNNYAADTC-D 1294

Query: 550  FPDWRTNIDCSIPCPPIESGGCGSKILELRRSLKANW 660
            FPDWR N+D SIPCPP   GGCG++ LELRR  + NW
Sbjct: 1295 FPDWRVNMDGSIPCPPKARGGCGTETLELRRIFEPNW 1331



 Score = 77.0 bits (188), Expect(2) = 3e-30
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = +2

Query: 314  DNCNTSIFNFHRSCPNPDCSYDLCLTCCLELREGRQLG 427
            DNCNTSI N HRSCPNPDCSYDLCLTCC ELR+G Q G
Sbjct: 1205 DNCNTSIVNLHRSCPNPDCSYDLCLTCCRELRKGLQPG 1242


>ref|XP_002321404.1| predicted protein [Populus trichocarpa] gi|222868400|gb|EEF05531.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score = 73.9 bits (180), Expect(2) = 7e-21
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = +2

Query: 314 DNCNTSIFNFHRSCPNPDCSYDLCLTCCLELREGRQLG 427
           DNC+TSI NFHRSCPNPDCSYDLCLTCC ELR G + G
Sbjct: 103 DNCSTSIVNFHRSCPNPDCSYDLCLTCCSELRIGFKPG 140



 Score = 52.4 bits (124), Expect(2) = 7e-21
 Identities = 23/42 (54%), Positives = 28/42 (66%)
 Frame = +1

Query: 535 DVVGQFPDWRTNIDCSIPCPPIESGGCGSKILELRRSLKANW 660
           D+  +FPDWR   D  IPCPP E GGCG++IL LRR   A +
Sbjct: 158 DMSCKFPDWRAESDGRIPCPPKELGGCGNEILTLRRIFDAKF 199


Top