BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027605
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148920.1| PREDICTED: putative ribosomal RNA methyltran...    91   1e-16
ref|XP_003600394.1| hypothetical protein MTR_3g060700 [Medicago ...    74   7e-15
ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltran...    84   1e-14
ref|XP_003530809.1| PREDICTED: putative ribosomal RNA methyltran...    82   4e-14
ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, p...    82   5e-14

>ref|XP_004148920.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Cucumis sativus] gi|449484971|ref|XP_004157033.1|
           PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
           methyltransferase NOP2-like [Cucumis sativus]
          Length = 611

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 8/88 (9%)
 Frame = -3

Query: 258 QKDVEAELQLNIKEEFDE-------KLEQRNFNHLIFQICNGELK-IVRILSNFKTLRQE 103
           +KD   E+QLNIK+E DE       +LE+ +            ++ IVR+LSNFK LRQE
Sbjct: 121 EKDAADEMQLNIKDESDEFRLPTKEELEEESLRPPDLSSLQRRIREIVRVLSNFKALRQE 180

Query: 102 GVTRKDYVEQLKRDLSSYYGYNEFLIGI 19
           G TRKDYVEQLK+D+ SYYGYNEFLIG+
Sbjct: 181 GATRKDYVEQLKKDIGSYYGYNEFLIGV 208


>ref|XP_003600394.1| hypothetical protein MTR_3g060700 [Medicago truncatula]
           gi|355489442|gb|AES70645.1| hypothetical protein
           MTR_3g060700 [Medicago truncatula]
          Length = 1069

 Score = 73.9 bits (180), Expect(2) = 7e-15
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = -3

Query: 147 KIVRILSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEFLIG 22
           +IVR+LSNFK LRQ+G TRKDYV+QLK D+ SYYGYNEFLIG
Sbjct: 584 EIVRVLSNFKALRQDGATRKDYVDQLKTDIRSYYGYNEFLIG 625



 Score = 31.2 bits (69), Expect(2) = 7e-15
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -2

Query: 205 EIGAEELQPPDLSNLQWRIKD 143
           E+  E L+PPDLSNLQ RIK+
Sbjct: 564 ELEEEALRPPDLSNLQRRIKE 584


>ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Glycine max]
          Length = 610

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 8/87 (9%)
 Frame = -3

Query: 258 QKDVEAELQLNIKEEFDE-------KLEQRNFNHLIFQICNGELK-IVRILSNFKTLRQE 103
           ++D +AE+QLNI +E DE       +LE               +K IVR+LSNFK LRQ+
Sbjct: 109 EEDADAEMQLNINQESDEFRLPTKEELEDEALRPPDLSNLQRRIKEIVRVLSNFKALRQD 168

Query: 102 GVTRKDYVEQLKRDLSSYYGYNEFLIG 22
           G TRK+YVEQLK+DL +YYGYNEFLIG
Sbjct: 169 GSTRKEYVEQLKKDLCTYYGYNEFLIG 195


>ref|XP_003530809.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Glycine max]
          Length = 614

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 8/87 (9%)
 Frame = -3

Query: 258 QKDVEAELQLNIKEEFDE-------KLEQRNFNHLIFQICNGELK-IVRILSNFKTLRQE 103
           ++D +AE+QLNI +E DE       +L++               K IVR+LSNFK LRQ+
Sbjct: 115 EEDADAEMQLNINQESDEFRLPTKEELDEEALRPPDLSNLQRRTKEIVRVLSNFKALRQD 174

Query: 102 GVTRKDYVEQLKRDLSSYYGYNEFLIG 22
           G TRK+YVEQLK+DL +YYGYNEFLIG
Sbjct: 175 GSTRKEYVEQLKKDLCTYYGYNEFLIG 201


>ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, putative [Ricinus
           communis] gi|223538025|gb|EEF39638.1| Proliferating-cell
           nucleolar antigen p120, putative [Ricinus communis]
          Length = 624

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/88 (53%), Positives = 56/88 (63%), Gaps = 8/88 (9%)
 Frame = -3

Query: 258 QKDVEAELQLNIKEEFDE-------KLEQRNFNHLIFQICNGELK-IVRILSNFKTLRQE 103
           +KD E EL+LNI EE DE       +LE         Q     ++ IVR+LSN K L+QE
Sbjct: 125 EKDAEEELRLNINEESDEFRLPTKEELEDEARRPPDLQNLQRRIREIVRVLSNLKDLKQE 184

Query: 102 GVTRKDYVEQLKRDLSSYYGYNEFLIGI 19
           G  RKDYVEQLK DL SYYGYN+FLIG+
Sbjct: 185 GARRKDYVEQLKMDLCSYYGYNDFLIGV 212