BLASTX nr result

ID: Coptis23_contig00027595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027595
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284205.1| PREDICTED: rac-like GTP-binding protein ARAC...   287   2e-75
ref|XP_002514274.1| rac gtpase, putative [Ricinus communis] gi|2...   284   1e-74
ref|XP_002440067.1| hypothetical protein SORBIDRAFT_09g025400 [S...   283   2e-74
ref|XP_002333978.1| predicted protein [Populus trichocarpa] gi|2...   283   3e-74
ref|NP_001056030.1| Os05g0513800 [Oryza sativa Japonica Group] g...   283   3e-74

>ref|XP_002284205.1| PREDICTED: rac-like GTP-binding protein ARAC7 isoform 1 [Vitis
           vinifera] gi|147781539|emb|CAN73708.1| hypothetical
           protein VITISV_023715 [Vitis vinifera]
           gi|297738799|emb|CBI28044.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  287 bits (734), Expect = 2e-75
 Identities = 144/174 (82%), Positives = 155/174 (89%), Gaps = 1/174 (0%)
 Frame = -3

Query: 612 SDYVPTVFDNFSANVAVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLLSRPS 433
           +DY+PTVFDNFSANVAVDG+IVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSL+SR S
Sbjct: 33  TDYIPTVFDNFSANVAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRAS 92

Query: 432 YENVMKKWMPELRRFAPNVPIVLVGTKLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGA 253
           YENV+KKWMPELRRFAPNVPIVLVGTKLDLR+ KGYL DH  S VITSAQGEELRKQIGA
Sbjct: 93  YENVLKKWMPELRRFAPNVPIVLVGTKLDLREDKGYLADHMGSNVITSAQGEELRKQIGA 152

Query: 252 AAYIECSSKTQQNVKAVFDTAIKAVLQPPXXXXXXXXXXXRS-GCSVMNVMCGG 94
           AAYIECSSKTQQNVKAVFDTAIK VLQPP           RS GCS+++++CGG
Sbjct: 153 AAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEVARKKRRRSTGCSIVSIVCGG 206


>ref|XP_002514274.1| rac gtpase, putative [Ricinus communis] gi|223546730|gb|EEF48228.1|
           rac gtpase, putative [Ricinus communis]
          Length = 209

 Score =  284 bits (726), Expect = 1e-74
 Identities = 144/178 (80%), Positives = 156/178 (87%), Gaps = 1/178 (0%)
 Frame = -3

Query: 612 SDYVPTVFDNFSANVAVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLLSRPS 433
           +DY+PTVFDNFSANVAVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSL+SR S
Sbjct: 33  TDYIPTVFDNFSANVAVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRAS 92

Query: 432 YENVMKKWMPELRRFAPNVPIVLVGTKLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGA 253
           YENV+KKWMPELRRFAPNVPIVLVGTKLDLRD +GYL DH +  VITSAQGEELRKQIGA
Sbjct: 93  YENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDRGYLADHMNFNVITSAQGEELRKQIGA 152

Query: 252 AAYIECSSKTQQNVKAVFDTAIKAVLQPP-XXXXXXXXXXXRSGCSVMNVMCGGGCVT 82
           AAYIECSSKTQQNVKAVFDTAIK VLQPP             SG +++++MC GGCV+
Sbjct: 153 AAYIECSSKTQQNVKAVFDTAIKVVLQPPRKKEMARKKKRRSSGRAIVSIMC-GGCVS 209


>ref|XP_002440067.1| hypothetical protein SORBIDRAFT_09g025400 [Sorghum bicolor]
           gi|241945352|gb|EES18497.1| hypothetical protein
           SORBIDRAFT_09g025400 [Sorghum bicolor]
          Length = 212

 Score =  283 bits (725), Expect = 2e-74
 Identities = 139/178 (78%), Positives = 152/178 (85%), Gaps = 3/178 (1%)
 Frame = -3

Query: 612 SDYVPTVFDNFSANVAVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLLSRPS 433
           +DY+PTVFDNFSANV+VDGNIVNLGLWDTAGQEDYSRLRPLSYRGAD+FVLAFSL+SR S
Sbjct: 33  TDYIPTVFDNFSANVSVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADVFVLAFSLISRAS 92

Query: 432 YENVMKKWMPELRRFAPNVPIVLVGTKLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGA 253
           YENV+KKWMPELRRFAPNVP+VLVGTKLDLRD + YL DH  +  IT+AQGEELRKQIGA
Sbjct: 93  YENVLKKWMPELRRFAPNVPVVLVGTKLDLRDHRAYLADHPGASTITTAQGEELRKQIGA 152

Query: 252 AAYIECSSKTQQNVKAVFDTAIKAVLQPP---XXXXXXXXXXXRSGCSVMNVMCGGGC 88
           AAYIECSSKTQQNVK+VFDTAIK VLQPP               SGCS+MN+MCG  C
Sbjct: 153 AAYIECSSKTQQNVKSVFDTAIKVVLQPPRRREAMPARKKNRRGSGCSIMNLMCGSTC 210


>ref|XP_002333978.1| predicted protein [Populus trichocarpa] gi|222839414|gb|EEE77751.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  283 bits (724), Expect = 3e-74
 Identities = 143/176 (81%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
 Frame = -3

Query: 609 DYVPTVFDNFSANVAVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLLSRPSY 430
           DY+PTVFDNFSANVAVDG+IVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSL+SR SY
Sbjct: 1   DYIPTVFDNFSANVAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASY 60

Query: 429 ENVMKKWMPELRRFAPNVPIVLVGTKLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGAA 250
           ENV+KKWMPELRRFAPNVPIVLVGTKLDLR+ +GYL DH +S VITSAQGEELRKQIGAA
Sbjct: 61  ENVLKKWMPELRRFAPNVPIVLVGTKLDLREDRGYLVDHMNSNVITSAQGEELRKQIGAA 120

Query: 249 AYIECSSKTQQNVKAVFDTAIKAVLQPPXXXXXXXXXXXRS-GCSVMNVMCGGGCV 85
           AYIECSSKTQQNVKAVFDTAIK V+QPP           RS GC++ +++C GGCV
Sbjct: 121 AYIECSSKTQQNVKAVFDTAIKVVIQPPRRKEMARKKRSRSAGCTIASIVC-GGCV 175


>ref|NP_001056030.1| Os05g0513800 [Oryza sativa Japonica Group]
           gi|75254124|sp|Q68Y52.1|RAC2_ORYSJ RecName:
           Full=Rac-like GTP-binding protein 2; AltName:
           Full=OsRac2 gi|5902928|dbj|BAA84493.1| small GTP-binding
           protein OsRac2 [Oryza sativa] gi|51451345|gb|AAU03100.1|
           small GTP-binding protein OsRac2 [Oryza sativa Japonica
           Group] gi|55733794|gb|AAV59301.1| putative racC protein
           [Oryza sativa Japonica Group]
           gi|113579581|dbj|BAF17944.1| Os05g0513800 [Oryza sativa
           Japonica Group] gi|125552970|gb|EAY98679.1| hypothetical
           protein OsI_20608 [Oryza sativa Indica Group]
           gi|222632213|gb|EEE64345.1| hypothetical protein
           OsJ_19185 [Oryza sativa Japonica Group]
          Length = 214

 Score =  283 bits (724), Expect = 3e-74
 Identities = 140/180 (77%), Positives = 153/180 (85%), Gaps = 4/180 (2%)
 Frame = -3

Query: 612 SDYVPTVFDNFSANVAVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLLSRPS 433
           +DY+PTVFDNFSANV+VDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSL+SR S
Sbjct: 34  TDYIPTVFDNFSANVSVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRAS 93

Query: 432 YENVMKKWMPELRRFAPNVPIVLVGTKLDLRDGKGYLNDHTSSGVITSAQGEELRKQIGA 253
           YENV+KKWMPELRRFAPNVPIVLVGTKLDLRD + YL DH ++  IT+AQGEELRKQIGA
Sbjct: 94  YENVLKKWMPELRRFAPNVPIVLVGTKLDLRDHRSYLADHPAASAITTAQGEELRKQIGA 153

Query: 252 AAYIECSSKTQQNVKAVFDTAIKAVLQPP----XXXXXXXXXXXRSGCSVMNVMCGGGCV 85
           AAYIECSSKTQQN+KAVFDTAIK VLQPP                +GCS+ N+MCG  CV
Sbjct: 154 AAYIECSSKTQQNIKAVFDTAIKVVLQPPRRRGETTMARKKTRRSTGCSLKNLMCGSACV 213


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