BLASTX nr result

ID: Coptis23_contig00027586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027586
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    58   7e-07
gb|EAZ04122.1| hypothetical protein OsI_26267 [Oryza sativa Indi...    56   3e-06
ref|NP_001147437.1| LOC100281046 [Zea mays] gi|195611366|gb|ACG2...    56   4e-06
gb|EEC79762.1| hypothetical protein OsI_21153 [Oryza sativa Indi...    55   5e-06
gb|EEE64835.1| hypothetical protein OsJ_19692 [Oryza sativa Japo...    55   5e-06

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
 Frame = +3

Query: 81  PTVLDWKNAAVMRDILKVFYESTKLCXXXXXXXXXXFFHQLSNICLVLSKY--ETDLSYA 254
           P V DW NA V    LK+F++ T             +FH+L  I  ++ KY    DL  +
Sbjct: 268 PLVEDWDNARVFVKFLKIFFDVTLRISGSLFTTSNAYFHKLCLIRNLIRKYLKSNDLLLS 327

Query: 255 SIIGSMKSKITKC---LREIPVALGLATCMDPRYKVSFLEVCFEIIYGYE 395
            +  +MK+K  K    L+   + L +   +DPRYK+ F++ CF+ +Y  E
Sbjct: 328 DMAQNMKAKYDKYWGNLKRSNLLLYVVVVLDPRYKLKFVQFCFDQLYDKE 377


>gb|EAZ04122.1| hypothetical protein OsI_26267 [Oryza sativa Indica Group]
          Length = 655

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = +3

Query: 81  PTVLDWKNAAVMRDILKVFYESTKLCXXXXXXXXXXFFHQLSNICLVLSKY--ETDLSYA 254
           PT +DW  A V+   LK F+E+T+L           FF +  +I L ++ +   TD +  
Sbjct: 428 PTKVDWSMAIVLCKCLKPFHEATELFSGTTYPTTNHFFGKFCSIKLYIADWCNSTDGTIK 487

Query: 255 SIIGSMKSKITKCLREIPVALGLATCMDPRYKVSFLEVCFEIIYGYEETHR 407
           ++  +M++K  K   +  +AL +A  +DPRYK S +E     IYG E   +
Sbjct: 488 TMANAMQTKYDKYWEKSNMALAVACFLDPRYKTSSIEYYGMKIYGLEAAEK 538


>ref|NP_001147437.1| LOC100281046 [Zea mays] gi|195611366|gb|ACG27513.1| transposon
           protein [Zea mays]
          Length = 719

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   FLMLDVALPY-QTIXXXXXXXXXXXXIPTVLDWKNAAVMRDILKVFYESTKLCXXXXXXX 179
           +LML  AL Y QT              P+  DWK      + LK+ Y+S           
Sbjct: 405 YLMLLAALDYKQTFTTLETCDDNYNEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPT 464

Query: 180 XXXFFHQLSNICLVLSKY--ETDLSYASIIGSMKSKITKCLREIPVALGLATCMDPRYKV 353
              FFH+   + L L+      D +++SI   M  +  K  ++  + L +A  MDPR+K+
Sbjct: 465 ANIFFHEAWKLQLELANGTGHEDPTFSSIAKDMHERFDKYWKDCSLVLAIAVVMDPRFKM 524

Query: 354 SFLEVCFEIIYG 389
             +E  +  IYG
Sbjct: 525 KLVEFSYSKIYG 536


>gb|EEC79762.1| hypothetical protein OsI_21153 [Oryza sativa Indica Group]
          Length = 722

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
 Frame = +3

Query: 3   FLMLDVALPY-QTIXXXXXXXXXXXXIPTVLDWKNAAVMRDILKVFYESTKLCXXXXXXX 179
           +LML  AL Y Q               P+  DWK      + LK+ Y+S           
Sbjct: 408 YLMLLAALDYKQAFSTLETSDDNYNEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPT 467

Query: 180 XXXFFHQLSNICLVLSKY--ETDLSYASIIGSMKSKITKCLREIPVALGLATCMDPRYKV 353
              FFH+   + L LS      D  ++SI   M  +  K  ++  + L +A  MDPR+K+
Sbjct: 468 SNLFFHEAWKLQLELSNATGHEDPVFSSIAKDMHERFDKYWKDCNLVLAIAVVMDPRFKM 527

Query: 354 SFLEVCFEIIYGYE 395
             +E  +  IYG E
Sbjct: 528 KLVEFSYSKIYGVE 541


>gb|EEE64835.1| hypothetical protein OsJ_19692 [Oryza sativa Japonica Group]
          Length = 722

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
 Frame = +3

Query: 3   FLMLDVALPY-QTIXXXXXXXXXXXXIPTVLDWKNAAVMRDILKVFYESTKLCXXXXXXX 179
           +LML  AL Y Q               P+  DWK      + LK+ Y+S           
Sbjct: 408 YLMLLAALDYKQAFSTLETSDDNYNEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPT 467

Query: 180 XXXFFHQLSNICLVLSKY--ETDLSYASIIGSMKSKITKCLREIPVALGLATCMDPRYKV 353
              FFH+   + L LS      D  ++SI   M  +  K  ++  + L +A  MDPR+K+
Sbjct: 468 SNLFFHEAWKLQLELSNATGHEDPVFSSIAKDMHERFDKYWKDCNLVLAIAVVMDPRFKM 527

Query: 354 SFLEVCFEIIYGYE 395
             +E  +  IYG E
Sbjct: 528 KLVEFSYSKIYGVE 541


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