BLASTX nr result

ID: Coptis23_contig00027583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027583
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265120.1| PREDICTED: uncharacterized protein LOC100267...    81   8e-14
ref|XP_004145717.1| PREDICTED: uncharacterized protein LOC101208...    71   1e-10
ref|XP_002300085.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003555125.1| PREDICTED: uncharacterized protein LOC100780...    68   9e-10
ref|XP_002871612.1| predicted protein [Arabidopsis lyrata subsp....    67   1e-09

>ref|XP_002265120.1| PREDICTED: uncharacterized protein LOC100267906 [Vitis vinifera]
           gi|296090259|emb|CBI40078.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/50 (74%), Positives = 43/50 (86%)
 Frame = +3

Query: 213 VFKNWSNKIRPEASSCLISLAHGTPAVFLATFSISSHAQRGFAVPNTVFQ 362
           VF+NWS KIRPEASSC ISLAHGTPAV LA+F++ + +QRGFA PNT FQ
Sbjct: 31  VFRNWSPKIRPEASSCFISLAHGTPAVVLASFALYADSQRGFAAPNTAFQ 80


>ref|XP_004145717.1| PREDICTED: uncharacterized protein LOC101208807 [Cucumis sativus]
           gi|449530839|ref|XP_004172399.1| PREDICTED:
           uncharacterized protein LOC101230318 [Cucumis sativus]
          Length = 244

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/50 (68%), Positives = 40/50 (80%)
 Frame = +3

Query: 213 VFKNWSNKIRPEASSCLISLAHGTPAVFLATFSISSHAQRGFAVPNTVFQ 362
           +F+NWS KIRPEA+SC IS AHGTPAVFLA+ +I S A RGFA PN+  Q
Sbjct: 26  LFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILSDAGRGFASPNSDLQ 75


>ref|XP_002300085.1| predicted protein [Populus trichocarpa] gi|222847343|gb|EEE84890.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/47 (65%), Positives = 39/47 (82%)
 Frame = +3

Query: 213 VFKNWSNKIRPEASSCLISLAHGTPAVFLATFSISSHAQRGFAVPNT 353
           VF+NWS KIRPEA+SCLIS+ HGTPAVFLAT ++ ++  RGF+  NT
Sbjct: 29  VFRNWSPKIRPEAASCLISIFHGTPAVFLATHALFTNPNRGFSSLNT 75


>ref|XP_003555125.1| PREDICTED: uncharacterized protein LOC100780631 [Glycine max]
          Length = 247

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = +3

Query: 213 VFKNWSNKIRPEASSCLISLAHGTPAVFLATFSISSHAQRGFAVPNTVFQ 362
           +F+ WS KIRPEASSC IS+ HGTPA  LA  +I S A RGFA  NT FQ
Sbjct: 23  IFRKWSPKIRPEASSCFISIFHGTPATLLAAAAILSAADRGFAAENTKFQ 72


>ref|XP_002871612.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317449|gb|EFH47871.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 553

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +3

Query: 213 VFKNWSNKIRPEASSCLISLAHGTPAVFLATFSISSHAQRGFAVPNTVFQ 362
           VF+NW  +IRPEASSCLIS+ HGTPAVFLAT ++ S + R FA  NT  Q
Sbjct: 336 VFRNWKPQIRPEASSCLISIFHGTPAVFLATRAVFSSSARSFASANTAAQ 385


Top