BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027578
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31099.3| unnamed protein product [Vitis vinifera]              227   4e-57
ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   169   2e-46
emb|CBI33445.3| unnamed protein product [Vitis vinifera]              183   8e-44
ref|XP_003635139.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   179   1e-42
sp|P93306.2|NDUS2_ARATH RecName: Full=NADH dehydrogenase [ubiqui...   177   4e-42

>emb|CBI31099.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score =  227 bits (579), Expect = 4e-57
 Identities = 112/119 (94%), Positives = 112/119 (94%)
 Frame = -1

Query: 471 GERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPK 292
           GERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFEPYTEGF VPAPSTYTAVEAPK
Sbjct: 267 GERWDRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPK 326

Query: 291 GEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 115
           GEFGVFLVSNGSNRPYR KIRAPG AH QGLD MSKHHM ADVVTIIGTQDIV GEVDR
Sbjct: 327 GEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 385


>ref|XP_004153172.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2-like [Cucumis sativus]
           gi|449471067|ref|XP_004153199.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus] gi|449471614|ref|XP_004153361.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2-like [Cucumis sativus]
           gi|449472439|ref|XP_004153594.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus] gi|449472462|ref|XP_004153601.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2-like [Cucumis sativus]
           gi|449532418|ref|XP_004173178.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 2-like
           [Cucumis sativus]
          Length = 137

 Score =  169 bits (427), Expect(3) = 2e-46
 Identities = 85/98 (86%), Positives = 87/98 (88%)
 Frame = -1

Query: 408 GQMTTGSSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIR 229
           G++   SSVYSTSIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRPYR KIR
Sbjct: 40  GKLPRSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIR 99

Query: 228 APGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 115
           APG AH QGLD MSKHHM ADVVTIIGTQDIV GEVDR
Sbjct: 100 APGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 137



 Score = 34.3 bits (77), Expect(3) = 2e-46
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 611 MCYNAEPRTLRLIY 570
           MCYNAEPRTLRLIY
Sbjct: 1   MCYNAEPRTLRLIY 14



 Score = 30.8 bits (68), Expect(3) = 2e-46
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = -3

Query: 526 MA*SIDRKPYDGKLSR 479
           MA SIDRKPYDGKL R
Sbjct: 29  MAQSIDRKPYDGKLPR 44


>emb|CBI33445.3| unnamed protein product [Vitis vinifera]
          Length = 130

 Score =  183 bits (464), Expect = 8e-44
 Identities = 91/98 (92%), Positives = 91/98 (92%)
 Frame = -1

Query: 408 GQMTTGSSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIR 229
           GQMTTGSSVYSTSIHHFEPYTEGF VPAPSTYTAVEAPKGEFGVFLVSNGSNRPYR KIR
Sbjct: 33  GQMTTGSSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIR 92

Query: 228 APGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 115
           APG AH QGLD MSKHHM ADVVTIIGTQDIV GEVDR
Sbjct: 93  APGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 130



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = -1

Query: 1002 MNSIVGLKHESARPFFQVGHFFRNAVRDNRD 910
            MNSIVGLKHESARPFFQVGHF RN VRDNRD
Sbjct: 1    MNSIVGLKHESARPFFQVGHFIRNTVRDNRD 31


>ref|XP_003635139.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2-like [Vitis vinifera]
          Length = 96

 Score =  179 bits (453), Expect = 1e-42
 Identities = 89/96 (92%), Positives = 89/96 (92%)
 Frame = -1

Query: 402 MTTGSSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAP 223
           MTTGSSVYSTSIHHFEPYTEGF VPAPSTYTAVEAPKGEFGVFLVSNGSNRPYR KIRAP
Sbjct: 1   MTTGSSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAP 60

Query: 222 GFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 115
           G AH QGLD MSKHHM ADVVTIIGTQDIV GEVDR
Sbjct: 61  GSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 96


>sp|P93306.2|NDUS2_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2; AltName: Full=NADH dehydrogenase subunit 7
          Length = 394

 Score =  177 bits (449), Expect = 4e-42
 Identities = 91/115 (79%), Positives = 95/115 (82%)
 Frame = -1

Query: 459 DRLYNRGSRCKLFLSIAGQMTTGSSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEFG 280
           DR     SRC++ LS+            +SIHHFE YTEGFSVPA STYTAVEAPKGEFG
Sbjct: 291 DRKLCPPSRCRMKLSM-----------ESSIHHFELYTEGFSVPASSTYTAVEAPKGEFG 339

Query: 279 VFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 115
           VFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR
Sbjct: 340 VFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394