BLASTX nr result

ID: Coptis23_contig00027571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027571
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285695.1| PREDICTED: uncharacterized protein LOC100267...    65   7e-09
ref|XP_002302334.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002306543.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
gb|ABK26544.1| unknown [Picea sitchensis]                              54   1e-05

>ref|XP_002285695.1| PREDICTED: uncharacterized protein LOC100267834 [Vitis vinifera]
           gi|302142041|emb|CBI19244.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
 Frame = -3

Query: 249 MDIKITNSNHSVIKTVSEGEFEFERDQLRVKRKTLQAVLEQCQRALELLSNKDD--DEAQ 76
           M+++++ S     K+ S    + E+D++ VKRKTLQAVLEQCQRALELL N  D  D   
Sbjct: 1   MEVEVSGS-----KSSSGDVPKVEKDRVLVKRKTLQAVLEQCQRALELLENTGDVLDGDD 55

Query: 75  EEEVMD----DHEGSSSASQCDDSETAEL 1
           E++ +D    + EG  SAS C D E  EL
Sbjct: 56  EDDAVDGAEVEAEGDGSASPCRDREADEL 84


>ref|XP_002302334.1| predicted protein [Populus trichocarpa] gi|222844060|gb|EEE81607.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/81 (39%), Positives = 51/81 (62%)
 Frame = -3

Query: 249 MDIKITNSNHSVIKTVSEGEFEFERDQLRVKRKTLQAVLEQCQRALELLSNKDDDEAQEE 70
           M++++++   S    + E   + ++DQ+RV+RKTL  VLEQCQRALELL+N D       
Sbjct: 1   MELEVSSPISSSAVDLEERNKQTDKDQVRVRRKTLVVVLEQCQRALELLNNTD------- 53

Query: 69  EVMDDHEGSSSASQCDDSETA 7
            V DD EG +S ++  + E++
Sbjct: 54  SVEDDDEGDTSGAESREVESS 74


>ref|XP_002306543.1| predicted protein [Populus trichocarpa] gi|222855992|gb|EEE93539.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
 Frame = -3

Query: 186 EFERDQLRVKRKTLQAVLEQCQRALELLSNKD--DDEA-----QEEEVMDDHEGSSSASQ 28
           E  +DQ+RV+RKTL+ VLEQCQRALELL+N D  DD+      + +EV       SS++ 
Sbjct: 18  ERNKDQVRVRRKTLKVVLEQCQRALELLNNADGVDDDGYSSGEESKEVESSPSRDSSSTS 77

Query: 27  CDDSETAEL 1
             D E  EL
Sbjct: 78  LGDQEADEL 86


>gb|ABK26544.1| unknown [Picea sitchensis]
          Length = 291

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 28/61 (45%), Positives = 39/61 (63%)
 Frame = -3

Query: 186 EFERDQLRVKRKTLQAVLEQCQRALELLSNKDDDEAQEEEVMDDHEGSSSASQCDDSETA 7
           E  ++++R++R+TLQ VLEQCQ+ALE L   D+ E    E   + E  + A Q  DSETA
Sbjct: 68  ECGKERVRIRRQTLQRVLEQCQKALESLKADDNSENDLSEEDSEAEAEAEAVQSTDSETA 127

Query: 6   E 4
           E
Sbjct: 128 E 128


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