BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027568
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis v...   140   8e-32
emb|CBI39682.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana] gi|3...   140   1e-31
ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arab...   140   1e-31
ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana] g...   140   1e-31

>ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
          Length = 384

 Score =  140 bits (354), Expect = 8e-32
 Identities = 71/109 (65%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   VTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMDTLTFGAPLFLR 182
           VT++HNEDCKKLLRLMG                LCK+GKVYAVA+EDMD+LTFGAP FLR
Sbjct: 134 VTKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPKFLR 193

Query: 183 QLSG-SSGKVLVVEYEVAKILEELKLAMDQFIDLCILCGCDYCESIRGI 326
            L   SS K+ V+E+++ KILEEL L MDQFIDLCIL GCDYC+SIRGI
Sbjct: 194 HLMDPSSRKIPVMEFDITKILEELNLTMDQFIDLCILSGCDYCDSIRGI 242


>emb|CBI39682.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  140 bits (354), Expect = 8e-32
 Identities = 71/109 (65%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   VTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMDTLTFGAPLFLR 182
           VT++HNEDCKKLLRLMG                LCK+GKVYAVA+EDMD+LTFGAP FLR
Sbjct: 134 VTKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPKFLR 193

Query: 183 QLSG-SSGKVLVVEYEVAKILEELKLAMDQFIDLCILCGCDYCESIRGI 326
            L   SS K+ V+E+++ KILEEL L MDQFIDLCIL GCDYC+SIRGI
Sbjct: 194 HLMDPSSRKIPVMEFDITKILEELNLTMDQFIDLCILSGCDYCDSIRGI 242


>ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana]
           gi|332006193|gb|AED93576.1| flap endonuclease-1
           [Arabidopsis thaliana]
          Length = 453

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   VTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMDTLTFGAPLFLR 182
           VT++HN+DCK+LLRLMG                LCK+GKVY VA+EDMD+LTFGAP FLR
Sbjct: 134 VTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLR 193

Query: 183 QLSG-SSGKVLVVEYEVAKILEELKLAMDQFIDLCILCGCDYCESIRGI 326
            L   SS K+ V+E+EVAKILEEL+L MDQFIDLCIL GCDYC+SIRGI
Sbjct: 194 HLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIRGI 242


>ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
           lyrata] gi|297320152|gb|EFH50574.1| hypothetical protein
           ARALYDRAFT_489493 [Arabidopsis lyrata subsp. lyrata]
          Length = 448

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   VTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMDTLTFGAPLFLR 182
           VT++HN+DCK+LLRLMG                LCK+GKVY VA+EDMD+LTFGAP FLR
Sbjct: 134 VTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLR 193

Query: 183 QLSG-SSGKVLVVEYEVAKILEELKLAMDQFIDLCILCGCDYCESIRGI 326
            L   SS K+ V+E+EVAKILEEL+L MDQFIDLCIL GCDYC+SIRGI
Sbjct: 194 HLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIRGI 242


>ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana]
           gi|317374929|sp|O65251.2|FEN1_ARATH RecName: Full=Flap
           endonuclease 1; Short=FEN-1; AltName: Full=Flap
           structure-specific endonuclease 1
           gi|332006194|gb|AED93577.1| flap endonuclease-1
           [Arabidopsis thaliana]
          Length = 383

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   VTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMDTLTFGAPLFLR 182
           VT++HN+DCK+LLRLMG                LCK+GKVY VA+EDMD+LTFGAP FLR
Sbjct: 134 VTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLR 193

Query: 183 QLSG-SSGKVLVVEYEVAKILEELKLAMDQFIDLCILCGCDYCESIRGI 326
            L   SS K+ V+E+EVAKILEEL+L MDQFIDLCIL GCDYC+SIRGI
Sbjct: 194 HLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIRGI 242