BLASTX nr result

ID: Coptis23_contig00027562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027562
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266...    89   4e-16
emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]    87   2e-15
gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]       78   9e-13
ref|XP_002315576.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12
ref|XP_003536838.1| PREDICTED: uncharacterized protein LOC100810...    71   1e-10

>ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266510 [Vitis vinifera]
          Length = 895

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 71/193 (36%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
 Frame = -2

Query: 564 EPVERKDRMKDSSKSHYDG--PEQKXXXXXXXXXXXXXXSTSLSPRVHKRT-YDGREHGE 394
           E ++RK+R ++S  S Y+   P+++              S+SLSPR  KRT + GREH E
Sbjct: 229 EFLDRKER-RESPPSRYEESRPKRRRSRSRERDKDRDKRSSSLSPRAQKRTSHHGREHAE 287

Query: 393 SSLHSSNER--RQHSDVDRNRVSNNXXXXXXXXXXXXXXXXXXXGYSPRKRRSEAAIXXX 220
            SLHS  +R  RQHSD DRNR+SNN                    YSPRKRR+EAAI   
Sbjct: 288 LSLHSLKDRSGRQHSDADRNRISNNGSSSHFRRHGGSASGLGG--YSPRKRRTEAAIKTP 345

Query: 219 XXXXXXXXXXSAGWDLPPVGTGSILAGT-SSDFQSLNQIVSTDRERESFDATTGVPEKLV 43
                     SAGWDLPP  T  + AG+  S  Q L   VS++ +         VP    
Sbjct: 346 SPTNRSPEKKSAGWDLPPSRTDGMNAGSVLSSLQVLKPTVSSNADELPSAVPVAVPVTAT 405

Query: 42  PAVDATSDIVKDS 4
            A      I  D+
Sbjct: 406 TAKPPLPRIYSDA 418


>emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]
          Length = 544

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 69/193 (35%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
 Frame = -2

Query: 564 EPVERKDRMKDSSKSHYDG--PEQKXXXXXXXXXXXXXXSTSLSPRVHKRT-YDGREHGE 394
           E ++RK+R ++S  S Y+   P+++              S+SLSPR  KRT + GREH E
Sbjct: 229 EFLDRKER-RESPPSRYEESRPKRRRSRSRERDKDRDKRSSSLSPRAQKRTSHHGREHAE 287

Query: 393 SSLHSSNER--RQHSDVDRNRVSNNXXXXXXXXXXXXXXXXXXXGYSPRKRRSEAAIXXX 220
            S HS  +R  RQHSD DRNR+SNN                    YSPRKRR+EAAI   
Sbjct: 288 LSSHSLKDRSGRQHSDADRNRISNNGSSSHFRRHGGSASGLGG--YSPRKRRTEAAIKTP 345

Query: 219 XXXXXXXXXXSAGWDLPPVGTGSILAGT-SSDFQSLNQIVSTDRERESFDATTGVPEKLV 43
                     +AGWDLPP  T  + AG+  S  Q L   VS++ +         VP    
Sbjct: 346 SPTNRSPEKKNAGWDLPPSRTDGMNAGSVLSSLQVLKPTVSSNADELPSAVPVAVPVTAT 405

Query: 42  PAVDATSDIVKDS 4
            A      I  D+
Sbjct: 406 TAKPPLPRIYSDA 418


>gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 787

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 62/164 (37%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
 Frame = -2

Query: 570 NLEPVERKDRMKDSSKSHYDGPEQKXXXXXXXXXXXXXXST-SLSPRVHKR-TYDGREHG 397
           +LE  ERK+R K+SSKSH++    K               + SLSPR HKR +Y  REH 
Sbjct: 88  HLETSERKER-KESSKSHHEELRLKRRRSRSREHEDRNRRSISLSPRAHKRGSYHKREHV 146

Query: 396 ESSLHSSNER--RQHSDVDRNRVSNNXXXXXXXXXXXXXXXXXXXGYSPRKRRSEAAIXX 223
           E SLHS  ER  RQ SD + N+++N+                    YSPRKR++EAA+  
Sbjct: 147 ELSLHSVKERSGRQQSDAENNQLANSSSSRHQRRHGGFASGLGG--YSPRKRKTEAAVKT 204

Query: 222 XXXXXXXXXXXSAGWDLPPVGTGSIL-AGTSSDFQSLNQIVSTD 94
                      SA WDL P  T ++  A   S+FQS NQ  S++
Sbjct: 205 PSPAKRSPEKKSAKWDLAPEETNNVFPAVILSNFQSPNQTASSN 248


>ref|XP_002315576.1| predicted protein [Populus trichocarpa] gi|222864616|gb|EEF01747.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 68/189 (35%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
 Frame = -2

Query: 570 NLEPVERKDRMKDSSKSHYDGPEQKXXXXXXXXXXXXXXST-SLSPRVHKR-TYDGREHG 397
           +LE  ERK+R K+SSKSH++    K               + SLSPR HKR +Y  REH 
Sbjct: 220 HLETSERKER-KESSKSHHEELRLKRRRSRSREHEDRNRRSISLSPRAHKRGSYHKREHV 278

Query: 396 ESSLHSSNER--RQHSDVDRNRVSNNXXXXXXXXXXXXXXXXXXXGYSPRKRRSEAAIXX 223
           E S HS  ER  RQ SD + N+++N+                    YSPRKR++EAAI  
Sbjct: 279 ELSSHSVKERSGRQQSDAENNQLTNSSSSRHQRRHGGFASGLGG--YSPRKRKTEAAIKT 336

Query: 222 XXXXXXXXXXXSAGWDLPPVGTGSIL-AGTSSDFQSLNQIVSTD-RERESFDATTGVPEK 49
                      SA WDL P  T ++  A   S+FQS NQ  S++  E  S       P K
Sbjct: 337 PSPAKRSPEKKSAKWDLAPEETNNVFPAVILSNFQSPNQTASSNIHEVVSAVPVVSAPMK 396

Query: 48  LVPAVDATS 22
            +  V  +S
Sbjct: 397 PLSGVSLSS 405


>ref|XP_003536838.1| PREDICTED: uncharacterized protein LOC100810537 [Glycine max]
          Length = 735

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 46/114 (40%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
 Frame = -2

Query: 447 SLSPRVHKRTYDGREHGESSLHS--SNERRQHSDVDRNRVSNNXXXXXXXXXXXXXXXXX 274
           S SPR  KRTY   E  E S+HS   + R ++ D+DRNRVS N                 
Sbjct: 120 SFSPREQKRTYQDGERKELSMHSLKDSSRTKNPDIDRNRVSTNGSSGHHHRHGVSTSGLG 179

Query: 273 XXGYSPRKRRSEAAIXXXXXXXXXXXXXSAGWDLPPVGTGSILAGTSSDFQSLN 112
              YSPRKR+SEAA               AGWDLPP GT +  A  SS F   N
Sbjct: 180 G--YSPRKRKSEAAAKTPSPSKHSLEKKRAGWDLPPAGTNNPSAVVSSSFPVSN 231


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