BLASTX nr result

ID: Coptis23_contig00027559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027559
         (1473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268776.1| PREDICTED: uncharacterized protein LOC100244...   657   0.0  
emb|CAN70095.1| hypothetical protein VITISV_014863 [Vitis vinifera]   655   0.0  
emb|CBI24512.3| unnamed protein product [Vitis vinifera]              654   0.0  
ref|XP_002322423.1| predicted protein [Populus trichocarpa] gi|2...   647   0.0  
ref|XP_002318271.1| predicted protein [Populus trichocarpa] gi|2...   646   0.0  

>ref|XP_002268776.1| PREDICTED: uncharacterized protein LOC100244660 [Vitis vinifera]
          Length = 544

 Score =  657 bits (1694), Expect = 0.0
 Identities = 313/430 (72%), Positives = 350/430 (81%), Gaps = 16/430 (3%)
 Frame = +3

Query: 24   VGPVSKNEFGSKEIAPSEVQSVFENSTSVDN-----------QTNEETSVKSLNSTSSEL 170
            V   +K    S  I   E  S + +S   DN           + N + +V   N TS   
Sbjct: 110  VNEPAKVPLSSSNITQEEEISSYVSSNIADNVEIASPLSMALKNNSDVTVAGSNPTSPAS 169

Query: 171  V-----VNSSKADSGSCDLYHGKWFYDSSGPLYTNNTCPVLTQMQNCQGNGRPDKDYESY 335
                  V +S  DSG CDLYHG WFYDSSGP YTNNTCPVLTQMQNCQGNGRPDK+YE++
Sbjct: 170  PSLPEDVGTSLVDSG-CDLYHGSWFYDSSGPSYTNNTCPVLTQMQNCQGNGRPDKEYENW 228

Query: 336  RWKPSQCNLPRFDAKKFLELMRGKTLAFIGDSVARNQMESMLCILWQVEVPRNRGNKRMQ 515
            RWKPSQC+LP+FDAKKFLELMRGKTLAFIGDSVARNQMESMLC+LWQVEVP+NRGN++MQ
Sbjct: 229  RWKPSQCDLPKFDAKKFLELMRGKTLAFIGDSVARNQMESMLCLLWQVEVPKNRGNRKMQ 288

Query: 516  RWYFKSTSVNIVRIWSSWLVHQTSAPLEFAPAGVVKLHLDAPDEGFMDLLPTFDVVVLSS 695
            RW+FKSTSV IVRIWSSWLVHQT+ PL+FAP GVVKLHLD PD  FM+ +P FDVVVLSS
Sbjct: 289  RWHFKSTSVMIVRIWSSWLVHQTTEPLDFAPEGVVKLHLDIPDNVFMEHIPKFDVVVLSS 348

Query: 696  GHWFAKQSVYVLNNEIVGGQLWWPDNSRPKKIDNVEAFGISVDTILTAMGTHPNYTGLTI 875
            GHWFAKQSVYVL NEIVGGQLWWPD SR  KI+N+EAFGISV+T L A+ THPNYTGLTI
Sbjct: 349  GHWFAKQSVYVLKNEIVGGQLWWPDKSRSMKINNIEAFGISVETSLAALVTHPNYTGLTI 408

Query: 876  VRSYSPDHYEGGAWNTGGSCTGKSRPTLEGELVENGFTNVMHEKQVGGFNKAIQKVSNRS 1055
            VRS+SPDHYEGGAWNTGGSCTGK RP   G+LVENGFTN+MHEKQV GF++AI+K +N+S
Sbjct: 409  VRSFSPDHYEGGAWNTGGSCTGKVRPASAGDLVENGFTNIMHEKQVMGFDRAIKKATNKS 468

Query: 1056 KLRLMDITEAFSYRLDGHPGPYRNPDPNKKTKRGPHGEPPPQDCLHWCMPGPVDTWNEIV 1235
            KLRLMDITEAF YR DGHPGPYR+PDPNK T+RGP G+PPPQDCLHWCMPGPVDTWNE V
Sbjct: 469  KLRLMDITEAFGYRHDGHPGPYRSPDPNKITQRGPDGKPPPQDCLHWCMPGPVDTWNEFV 528

Query: 1236 LEIIRREYEG 1265
            LE IRRE+ G
Sbjct: 529  LETIRREFNG 538


>emb|CAN70095.1| hypothetical protein VITISV_014863 [Vitis vinifera]
          Length = 539

 Score =  655 bits (1690), Expect = 0.0
 Identities = 309/422 (73%), Positives = 351/422 (83%), Gaps = 11/422 (2%)
 Frame = +3

Query: 30   PVSKNEFGSKEIAPSEVQSVFENSTSVDN------QTNEETSVKSLNSTSSELV-----V 176
            P+S +    +E   S V S   ++  + +      + N + +V   N TS         V
Sbjct: 117  PLSSSNIXQEEEISSYVSSNIADNVEIASPLSMALKNNSDVTVXGSNPTSPASPSLPEDV 176

Query: 177  NSSKADSGSCDLYHGKWFYDSSGPLYTNNTCPVLTQMQNCQGNGRPDKDYESYRWKPSQC 356
             +S  DSG CDLYHG WFYDSSGP YTNNTCPVLTQMQNCQGNGRPDK+YE++RWKPSQC
Sbjct: 177  GTSLVDSG-CDLYHGSWFYDSSGPSYTNNTCPVLTQMQNCQGNGRPDKEYENWRWKPSQC 235

Query: 357  NLPRFDAKKFLELMRGKTLAFIGDSVARNQMESMLCILWQVEVPRNRGNKRMQRWYFKST 536
            +LP+FDAKKFLELMRGKTLAFIGDSVARNQMESMLC+LWQVEVP+NRGN++MQRW+FKST
Sbjct: 236  DLPKFDAKKFLELMRGKTLAFIGDSVARNQMESMLCLLWQVEVPKNRGNRKMQRWHFKST 295

Query: 537  SVNIVRIWSSWLVHQTSAPLEFAPAGVVKLHLDAPDEGFMDLLPTFDVVVLSSGHWFAKQ 716
            SV IVRIWSSWLVHQT+ PL+FAP GVVKLHLD PD  FM+ +P FDVVVLSSGHWFAKQ
Sbjct: 296  SVMIVRIWSSWLVHQTTEPLDFAPEGVVKLHLDIPDNVFMEHIPKFDVVVLSSGHWFAKQ 355

Query: 717  SVYVLNNEIVGGQLWWPDNSRPKKIDNVEAFGISVDTILTAMGTHPNYTGLTIVRSYSPD 896
            SVYVL NEIVGGQLWWPD SR  KI+N+EAFGISV+T L A+ THPNYTGLTIVRS+SPD
Sbjct: 356  SVYVLKNEIVGGQLWWPDKSRSMKINNIEAFGISVETSLAALVTHPNYTGLTIVRSFSPD 415

Query: 897  HYEGGAWNTGGSCTGKSRPTLEGELVENGFTNVMHEKQVGGFNKAIQKVSNRSKLRLMDI 1076
            HYEGGAWNTGGSCTGK RP   G+LVENGFTN+MHEKQV GF++AI+K +N+SKLRLMDI
Sbjct: 416  HYEGGAWNTGGSCTGKVRPASAGDLVENGFTNIMHEKQVMGFDRAIKKATNKSKLRLMDI 475

Query: 1077 TEAFSYRLDGHPGPYRNPDPNKKTKRGPHGEPPPQDCLHWCMPGPVDTWNEIVLEIIRRE 1256
            TEAF YR DGHPGPYR+PDPNK T+RGP G+PPPQDCLHWCMPGPVDTWNE VLE IRRE
Sbjct: 476  TEAFGYRHDGHPGPYRSPDPNKITQRGPDGKPPPQDCLHWCMPGPVDTWNEFVLETIRRE 535

Query: 1257 YE 1262
            ++
Sbjct: 536  FQ 537


>emb|CBI24512.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  654 bits (1688), Expect = 0.0
 Identities = 312/428 (72%), Positives = 349/428 (81%), Gaps = 16/428 (3%)
 Frame = +3

Query: 24   VGPVSKNEFGSKEIAPSEVQSVFENSTSVDN-----------QTNEETSVKSLNSTSSEL 170
            V   +K    S  I   E  S + +S   DN           + N + +V   N TS   
Sbjct: 50   VNEPAKVPLSSSNITQEEEISSYVSSNIADNVEIASPLSMALKNNSDVTVAGSNPTSPAS 109

Query: 171  V-----VNSSKADSGSCDLYHGKWFYDSSGPLYTNNTCPVLTQMQNCQGNGRPDKDYESY 335
                  V +S  DSG CDLYHG WFYDSSGP YTNNTCPVLTQMQNCQGNGRPDK+YE++
Sbjct: 110  PSLPEDVGTSLVDSG-CDLYHGSWFYDSSGPSYTNNTCPVLTQMQNCQGNGRPDKEYENW 168

Query: 336  RWKPSQCNLPRFDAKKFLELMRGKTLAFIGDSVARNQMESMLCILWQVEVPRNRGNKRMQ 515
            RWKPSQC+LP+FDAKKFLELMRGKTLAFIGDSVARNQMESMLC+LWQVEVP+NRGN++MQ
Sbjct: 169  RWKPSQCDLPKFDAKKFLELMRGKTLAFIGDSVARNQMESMLCLLWQVEVPKNRGNRKMQ 228

Query: 516  RWYFKSTSVNIVRIWSSWLVHQTSAPLEFAPAGVVKLHLDAPDEGFMDLLPTFDVVVLSS 695
            RW+FKSTSV IVRIWSSWLVHQT+ PL+FAP GVVKLHLD PD  FM+ +P FDVVVLSS
Sbjct: 229  RWHFKSTSVMIVRIWSSWLVHQTTEPLDFAPEGVVKLHLDIPDNVFMEHIPKFDVVVLSS 288

Query: 696  GHWFAKQSVYVLNNEIVGGQLWWPDNSRPKKIDNVEAFGISVDTILTAMGTHPNYTGLTI 875
            GHWFAKQSVYVL NEIVGGQLWWPD SR  KI+N+EAFGISV+T L A+ THPNYTGLTI
Sbjct: 289  GHWFAKQSVYVLKNEIVGGQLWWPDKSRSMKINNIEAFGISVETSLAALVTHPNYTGLTI 348

Query: 876  VRSYSPDHYEGGAWNTGGSCTGKSRPTLEGELVENGFTNVMHEKQVGGFNKAIQKVSNRS 1055
            VRS+SPDHYEGGAWNTGGSCTGK RP   G+LVENGFTN+MHEKQV GF++AI+K +N+S
Sbjct: 349  VRSFSPDHYEGGAWNTGGSCTGKVRPASAGDLVENGFTNIMHEKQVMGFDRAIKKATNKS 408

Query: 1056 KLRLMDITEAFSYRLDGHPGPYRNPDPNKKTKRGPHGEPPPQDCLHWCMPGPVDTWNEIV 1235
            KLRLMDITEAF YR DGHPGPYR+PDPNK T+RGP G+PPPQDCLHWCMPGPVDTWNE V
Sbjct: 409  KLRLMDITEAFGYRHDGHPGPYRSPDPNKITQRGPDGKPPPQDCLHWCMPGPVDTWNEFV 468

Query: 1236 LEIIRREY 1259
            LE IRRE+
Sbjct: 469  LETIRREF 476


>ref|XP_002322423.1| predicted protein [Populus trichocarpa] gi|222869419|gb|EEF06550.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  647 bits (1670), Expect = 0.0
 Identities = 286/353 (81%), Positives = 326/353 (92%)
 Frame = +3

Query: 204  CDLYHGKWFYDSSGPLYTNNTCPVLTQMQNCQGNGRPDKDYESYRWKPSQCNLPRFDAKK 383
            CDLY G WFYDS GPLYTNNTCPVLTQMQNCQGNGRPDK+YE++RWKPSQC+LPRFDAKK
Sbjct: 1    CDLYQGSWFYDSLGPLYTNNTCPVLTQMQNCQGNGRPDKEYENWRWKPSQCDLPRFDAKK 60

Query: 384  FLELMRGKTLAFIGDSVARNQMESMLCILWQVEVPRNRGNKRMQRWYFKSTSVNIVRIWS 563
            FLELMRGKT+AFIGDSVARNQMESMLC+LWQ + P+NRGNK+MQR++F+STS  +VRIWS
Sbjct: 61   FLELMRGKTIAFIGDSVARNQMESMLCLLWQAKAPKNRGNKKMQRYFFRSTSTMVVRIWS 120

Query: 564  SWLVHQTSAPLEFAPAGVVKLHLDAPDEGFMDLLPTFDVVVLSSGHWFAKQSVYVLNNEI 743
            SWLVHQTS  ++FAP GVVKLHLDAPDE FM+ +P FDV+VLSSGHWFAKQSVYVLNNEI
Sbjct: 121  SWLVHQTSESIDFAPKGVVKLHLDAPDEHFMEFIPNFDVIVLSSGHWFAKQSVYVLNNEI 180

Query: 744  VGGQLWWPDNSRPKKIDNVEAFGISVDTILTAMGTHPNYTGLTIVRSYSPDHYEGGAWNT 923
            VGGQLWWPD SRP KI+NVEAFGISV+TILT++ THPN+TGLTI+R+YSPDHYEGGAWNT
Sbjct: 181  VGGQLWWPDRSRPMKINNVEAFGISVETILTSIATHPNFTGLTILRTYSPDHYEGGAWNT 240

Query: 924  GGSCTGKSRPTLEGELVENGFTNVMHEKQVGGFNKAIQKVSNRSKLRLMDITEAFSYRLD 1103
            GGSCTGK +P   GELVENGFT +MH+KQ+ GF++AI K +N+SKL+LMDITE+F YR D
Sbjct: 241  GGSCTGKEKPLAPGELVENGFTEIMHKKQITGFDRAINKATNKSKLKLMDITESFGYRHD 300

Query: 1104 GHPGPYRNPDPNKKTKRGPHGEPPPQDCLHWCMPGPVDTWNEIVLEIIRREYE 1262
            GHPGPYR+PDPNK TKRGPHG+PPPQDCLHWCMPGPVDTWNE+VLEIIRR++E
Sbjct: 301  GHPGPYRSPDPNKLTKRGPHGKPPPQDCLHWCMPGPVDTWNELVLEIIRRDFE 353


>ref|XP_002318271.1| predicted protein [Populus trichocarpa] gi|222858944|gb|EEE96491.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  646 bits (1666), Expect = 0.0
 Identities = 295/400 (73%), Positives = 346/400 (86%), Gaps = 9/400 (2%)
 Frame = +3

Query: 87   VFE-NSTSVDNQTNEETSVKSLNSTSSELVVNSSKADSGS--------CDLYHGKWFYDS 239
            +FE N +S+D   + +  V   +S+S    VN S +  GS        CDLY G WFYDS
Sbjct: 68   IFEGNQSSIDRGHDSDVDVVDKDSSSG---VNVSDSQPGSDLQESTTGCDLYRGNWFYDS 124

Query: 240  SGPLYTNNTCPVLTQMQNCQGNGRPDKDYESYRWKPSQCNLPRFDAKKFLELMRGKTLAF 419
             GPLYTNNTCPVLTQMQNCQGNGRPDK+YE++RWKPSQCNLPRFDAKKFLELMRGKT+AF
Sbjct: 125  LGPLYTNNTCPVLTQMQNCQGNGRPDKEYENWRWKPSQCNLPRFDAKKFLELMRGKTIAF 184

Query: 420  IGDSVARNQMESMLCILWQVEVPRNRGNKRMQRWYFKSTSVNIVRIWSSWLVHQTSAPLE 599
            IGDSVARNQMESMLC+LWQ + P+N+GNK+MQR++F+STS  +VRIWSSWLVHQTS P++
Sbjct: 185  IGDSVARNQMESMLCLLWQAKAPKNQGNKKMQRYFFRSTSTMVVRIWSSWLVHQTSEPID 244

Query: 600  FAPAGVVKLHLDAPDEGFMDLLPTFDVVVLSSGHWFAKQSVYVLNNEIVGGQLWWPDNSR 779
            FAP GVVKLHLDAPDE FM+ +P+FDV+VLSSGHWFAKQSVYVLNNEIVGGQLWWPD SR
Sbjct: 245  FAPEGVVKLHLDAPDEHFMEFIPSFDVIVLSSGHWFAKQSVYVLNNEIVGGQLWWPDKSR 304

Query: 780  PKKIDNVEAFGISVDTILTAMGTHPNYTGLTIVRSYSPDHYEGGAWNTGGSCTGKSRPTL 959
            P KI+N+EAFGISV+TILT++ +HPNYTGLTI+RSYSPDHYEGGAWNTGGSCTGK +P  
Sbjct: 305  PMKINNIEAFGISVETILTSIASHPNYTGLTILRSYSPDHYEGGAWNTGGSCTGKEKPLA 364

Query: 960  EGELVENGFTNVMHEKQVGGFNKAIQKVSNRSKLRLMDITEAFSYRLDGHPGPYRNPDPN 1139
             GELV N FT++MH+KQ+ GF++AI+K +++SKL+LMDITEAF YR DGHPGPYR+ DPN
Sbjct: 365  PGELVGNSFTDIMHKKQIAGFDRAIKKATDKSKLKLMDITEAFGYRHDGHPGPYRSLDPN 424

Query: 1140 KKTKRGPHGEPPPQDCLHWCMPGPVDTWNEIVLEIIRREY 1259
            K TKRGP G+PPPQDCLHWCMPGPVDTWNE+VLEIIRR++
Sbjct: 425  KLTKRGPDGKPPPQDCLHWCMPGPVDTWNELVLEIIRRDF 464


Top