BLASTX nr result

ID: Coptis23_contig00027556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027556
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX33318.1| secondary cell wall-related glycosyltransferase f...   236   5e-60
ref|XP_002326337.1| glycosyl transferase [Populus trichocarpa] g...   234   1e-59
gb|AAX33319.1| secondary cell wall-related glycosyltransferase f...   234   2e-59
gb|ABP65661.1| secondary wall-associated glycosyltransferase fam...   234   2e-59
ref|XP_002279651.1| PREDICTED: probable beta-1,4-xylosyltransfer...   231   9e-59

>gb|AAX33318.1| secondary cell wall-related glycosyltransferase family 43 [Populus
           tremula x Populus tremuloides]
          Length = 359

 Score =  236 bits (601), Expect = 5e-60
 Identities = 123/228 (53%), Positives = 160/228 (70%), Gaps = 3/228 (1%)
 Frame = -1

Query: 675 MGSLDKSKKRLQLWKKAVLHFLLCFVMGFLIGFAPNKTTSDFLRRLMLNNSLDSQEF-SP 499
           MGSL++SK+++QLWKKA++HF LCFVMGF  GFAP    S F R ++ +N   S E    
Sbjct: 1   MGSLERSKRKVQLWKKAIVHFGLCFVMGFFTGFAPGGKASIFSRHVVASNKSQSVEMLHQ 60

Query: 498 QPSEVLH-QEMSRSLMGEPPVAVPTSTDGNSNPALFAINEDD-DAELIPRKQLIFITAVK 325
           Q + V H   ++RSL+ E PV  P+S+   S PA F   E++ + +L+PR+  I +T + 
Sbjct: 61  QVASVPHASNVNRSLIAESPVPTPSSSK-ESEPAKFLEKEEEPEPKLLPRRLAIIVTPIS 119

Query: 324 PLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTGVMYRHLVYKENFT 145
              +  QG FLRRLA T+ LVPPPL+WI+VE  SDS E S+ILRKTG+MYRHLV KENFT
Sbjct: 120 T-EDPYQGVFLRRLANTVKLVPPPLLWIVVEGQSDSDEVSEILRKTGIMYRHLVIKENFT 178

Query: 144 DSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIEV 1
           D +AE+DHQ+N AL HIE HRL+GI+HF  + N YDL FF  LR+IEV
Sbjct: 179 DPEAELDHQRNVALRHIEQHRLSGIVHFAGLSNVYDLGFFDELRQIEV 226


>ref|XP_002326337.1| glycosyl transferase [Populus trichocarpa]
           gi|222833530|gb|EEE72007.1| glycosyl transferase
           [Populus trichocarpa] gi|333951811|gb|AEG25423.1|
           glycosyltransferase GT43A [Populus trichocarpa]
          Length = 359

 Score =  234 bits (597), Expect = 1e-59
 Identities = 124/235 (52%), Positives = 159/235 (67%), Gaps = 10/235 (4%)
 Frame = -1

Query: 675 MGSLDKSKKRLQLWKKAVLHFLLCFVMGFLIGFAPNKTTSDFLRRLMLNNSLDSQEFSPQ 496
           MGSL++SKK++QLWKKA++HF LCFVMGF  GFAP    S F   ++ +N         Q
Sbjct: 1   MGSLERSKKKVQLWKKAIVHFGLCFVMGFFTGFAPGGKASIFSSHVVASNK-------SQ 53

Query: 495 PSEVLHQEMS---------RSLMGEPPVAVPTSTDGNSNPALFAINEDDDA-ELIPRKQL 346
           P E+LHQ+++         RSL+ E PV  P S+   S PA F   E++   +L+PR+  
Sbjct: 54  PVEMLHQQVASTPHASNVNRSLIAESPVPTPLSSK-ESEPAKFLEKEEEPKPKLLPRRLA 112

Query: 345 IFITAVKPLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTGVMYRHL 166
           I +T +    +  QG FLRRLA T+ LVPPPL+WI+VE  SDS E S+ILRKTG+MYRHL
Sbjct: 113 IIVTPIST-EDPYQGVFLRRLANTIRLVPPPLLWIVVEGQSDSDEVSEILRKTGIMYRHL 171

Query: 165 VYKENFTDSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIEV 1
           V KENFTD +AE+DHQ+N AL HIE HRL+GI+HF  + N YDL FF  LR+IEV
Sbjct: 172 VIKENFTDPEAELDHQRNVALRHIEQHRLSGIVHFAGLSNVYDLGFFDELRQIEV 226


>gb|AAX33319.1| secondary cell wall-related glycosyltransferase family 43 [Populus
           tremula x Populus tremuloides]
          Length = 356

 Score =  234 bits (596), Expect = 2e-59
 Identities = 121/234 (51%), Positives = 159/234 (67%), Gaps = 9/234 (3%)
 Frame = -1

Query: 675 MGSLDKSKKRLQLWKKAVLHFLLCFVMGFLIGFAPNKTTSDFLRRLMLNNSLDSQEFSPQ 496
           MGS+++SK+R+QLWKKA++HF LCFVMGF  GFAP    S F   +  +N   S    PQ
Sbjct: 1   MGSVERSKRRVQLWKKAIVHFGLCFVMGFFTGFAPAGKASIFTSHVAASNKSQSL---PQ 57

Query: 495 PSEVLHQE---------MSRSLMGEPPVAVPTSTDGNSNPALFAINEDDDAELIPRKQLI 343
           P E+LHQ+         ++RSL+ E  V  P S+   S+ A F   E+ +++L PR+  I
Sbjct: 58  PVEMLHQQAASAPHASNVNRSLIAETAVPAPPSSK-ESDHATFLEKEETESKLAPRRLAI 116

Query: 342 FITAVKPLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTGVMYRHLV 163
            +T      +  QG FLRRLA T+ LVPPPL+WI+VE  SDS E S++LRKTG+MYRHLV
Sbjct: 117 IVTPTST-KDPYQGVFLRRLANTIRLVPPPLLWIVVEGQSDSDEVSEVLRKTGIMYRHLV 175

Query: 162 YKENFTDSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIEV 1
           +KENFTD +AE+DHQ+N AL HIE HRL+GI+HF  + N YDL FF  +R+IEV
Sbjct: 176 FKENFTDPEAELDHQRNVALRHIEKHRLSGIVHFAGLSNVYDLGFFDEIRQIEV 229


>gb|ABP65661.1| secondary wall-associated glycosyltransferase family 43B [Populus
           tremula x Populus alba]
          Length = 356

 Score =  234 bits (596), Expect = 2e-59
 Identities = 121/234 (51%), Positives = 159/234 (67%), Gaps = 9/234 (3%)
 Frame = -1

Query: 675 MGSLDKSKKRLQLWKKAVLHFLLCFVMGFLIGFAPNKTTSDFLRRLMLNNSLDSQEFSPQ 496
           MGS+++SK+R+QLWKKA++HF LCFVMGF  GFAP    S F   +  +N   S    PQ
Sbjct: 1   MGSVERSKRRVQLWKKAIVHFGLCFVMGFFTGFAPAGKASIFTSHVAASNKSQSL---PQ 57

Query: 495 PSEVLHQE---------MSRSLMGEPPVAVPTSTDGNSNPALFAINEDDDAELIPRKQLI 343
           P E+LHQ+         ++RSL+ E  V  P S+   S+ A F   E+ +++L PR+  I
Sbjct: 58  PVEMLHQQAASAPHASNVNRSLIAETAVPAPPSSK-ESDHATFLEKEETESKLAPRRLAI 116

Query: 342 FITAVKPLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTGVMYRHLV 163
            +T      +  QG FLRRLA T+ LVPPPL+WI+VE  SDS E S++LRKTG+MYRHLV
Sbjct: 117 IVTPTST-KDPYQGVFLRRLANTIRLVPPPLLWIVVEGQSDSDEVSEVLRKTGIMYRHLV 175

Query: 162 YKENFTDSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIEV 1
           +KENFTD +AE+DHQ+N AL HIE HRL+GI+HF  + N YDL FF  +R+IEV
Sbjct: 176 FKENFTDPEAELDHQRNVALRHIEKHRLSGIVHFAGLSNVYDLGFFDEIRQIEV 229


>ref|XP_002279651.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9 [Vitis
           vinifera]
          Length = 357

 Score =  231 bits (590), Expect = 9e-59
 Identities = 123/232 (53%), Positives = 157/232 (67%), Gaps = 7/232 (3%)
 Frame = -1

Query: 675 MGSLDKSKKRLQLWKKAVLHFLLCFVMGFLIGFAPNKTTSDFLRRLMLNNSLDSQEFSPQ 496
           MGS ++SKKR+QLWKKAV+ F LCFVMGF +GFAP    S F        +L+  +FSPQ
Sbjct: 1   MGSSERSKKRVQLWKKAVVQFSLCFVMGFFMGFAPAGKASFFSSNAA---ALNQSQFSPQ 57

Query: 495 PSEVLHQEMS-------RSLMGEPPVAVPTSTDGNSNPALFAINEDDDAELIPRKQLIFI 337
           P E+LH  M+       R+LM E PV VP  +            ED+  +L+P + LI +
Sbjct: 58  PVEMLHLSMTPNDGNGNRTLMAETPVEVPARSREVETAESLQEGEDEP-KLVPGRLLIIV 116

Query: 336 TAVKPLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTGVMYRHLVYK 157
           T      +  +G  LRRLAYTL LVPPPL+WI+VE+ +DSSE S+ILRKTG+MYRHLV K
Sbjct: 117 TPAGS-EDPSRGVLLRRLAYTLRLVPPPLLWIVVEAQTDSSEVSEILRKTGIMYRHLVSK 175

Query: 156 ENFTDSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIEV 1
           ENFT+  AEMDHQ+N AL+HIEHH+L+GI+HF  + N YDL FF  +R+IEV
Sbjct: 176 ENFTEPAAEMDHQRNLALSHIEHHKLSGIVHFAALSNVYDLRFFDEIRDIEV 227


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