BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027550
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
tpg|DAA48720.1| TPA: hypothetical protein ZEAMMB73_778200 [Zea m...   180   9e-44
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas...   179   2e-43
ref|XP_002445711.1| hypothetical protein SORBIDRAFT_07g024560 [S...   178   5e-43
ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatu...   177   1e-42

>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/132 (62%), Positives = 104/132 (78%)
 Frame = +2

Query: 8   GVFDIVKRTDYRVILQNENQLEISFTRTWNSSQKGTLVPLNIDTRFVMLEGSHGFYTYSI 187
           G+FD++K   ++VI++ E Q+E+SFTRTW+SSQ+G LVPLNID RFVML GS GFY+Y+I
Sbjct: 52  GIFDVIKGRSFKVIVETEEQVEVSFTRTWDSSQEGKLVPLNIDKRFVMLRGSSGFYSYAI 111

Query: 188 YEHMEGWPDFNLNETRVAFKLNEDLFRNMAVDQNRQRRMPLSDDRNRNRGQPLAYPEAVR 367
           YEH++ WP FNL ETR+AFKL +D F  M    NRQR MPL DDR   RGQPLAYPEAV+
Sbjct: 112 YEHLKEWPGFNLGETRIAFKLRKDKFHYMIAADNRQRYMPLPDDRLPPRGQPLAYPEAVQ 171

Query: 368 FVDPIESEFAGQ 403
            V+P+E +F G+
Sbjct: 172 LVNPVEPDFKGE 183


>tpg|DAA48720.1| TPA: hypothetical protein ZEAMMB73_778200 [Zea mays]
          Length = 646

 Score =  180 bits (457), Expect = 9e-44
 Identities = 82/132 (62%), Positives = 101/132 (76%)
 Frame = +2

Query: 8   GVFDIVKRTDYRVILQNENQLEISFTRTWNSSQKGTLVPLNIDTRFVMLEGSHGFYTYSI 187
           G+FD++K T++R++ Q+ENQ E+SFTR W+ S +G  VPLNID RF++L GS GFYTY I
Sbjct: 79  GIFDVIKGTEFRIVYQDENQAEVSFTRNWDPSLEGKAVPLNIDKRFIVLRGSSGFYTYGI 138

Query: 188 YEHMEGWPDFNLNETRVAFKLNEDLFRNMAVDQNRQRRMPLSDDRNRNRGQPLAYPEAVR 367
           YEH EGWPDF L ETRVAFKL +D+F  MA+  +RQR MP+ DDR   RGQPLAYPEAV 
Sbjct: 139 YEHKEGWPDFGLGETRVAFKLRKDMFHYMALADDRQRIMPMPDDRLPPRGQPLAYPEAVL 198

Query: 368 FVDPIESEFAGQ 403
            VDPI  E  G+
Sbjct: 199 LVDPINPELRGE 210


>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
           [Vitis vinifera]
          Length = 643

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/132 (62%), Positives = 104/132 (78%)
 Frame = +2

Query: 8   GVFDIVKRTDYRVILQNENQLEISFTRTWNSSQKGTLVPLNIDTRFVMLEGSHGFYTYSI 187
           G+FD++K T++RVI++NE Q+EISFTR W+ S +G LVPLNID RF+ML GS GFY+Y+I
Sbjct: 68  GIFDVIKGTNFRVIVENEEQVEISFTRMWDPSLEGKLVPLNIDKRFIMLRGSSGFYSYAI 127

Query: 188 YEHMEGWPDFNLNETRVAFKLNEDLFRNMAVDQNRQRRMPLSDDRNRNRGQPLAYPEAVR 367
           YEH++ WP F L ETR+AFKL +D F  MA+  NRQR MPL DDR   RGQPLAYPEAV 
Sbjct: 128 YEHLKEWPAFTLAETRIAFKLRKDKFHYMAMADNRQRFMPLPDDRLPGRGQPLAYPEAVL 187

Query: 368 FVDPIESEFAGQ 403
            V+P+E EF G+
Sbjct: 188 LVNPVEPEFKGE 199


>ref|XP_002445711.1| hypothetical protein SORBIDRAFT_07g024560 [Sorghum bicolor]
           gi|241942061|gb|EES15206.1| hypothetical protein
           SORBIDRAFT_07g024560 [Sorghum bicolor]
          Length = 663

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/132 (62%), Positives = 100/132 (75%)
 Frame = +2

Query: 8   GVFDIVKRTDYRVILQNENQLEISFTRTWNSSQKGTLVPLNIDTRFVMLEGSHGFYTYSI 187
           G+FD++K T++R+I Q+ENQ E+SFTR W+ S +G  VPLNID RF++L GS GFYTY I
Sbjct: 96  GIFDVIKGTEFRIIYQDENQAEVSFTRNWDPSLEGKAVPLNIDKRFIVLRGSSGFYTYGI 155

Query: 188 YEHMEGWPDFNLNETRVAFKLNEDLFRNMAVDQNRQRRMPLSDDRNRNRGQPLAYPEAVR 367
           YEH EGWPDF L ETRVAFKL +D F  MA+  +RQR MP+ DDR   RGQPLAYPEAV 
Sbjct: 156 YEHKEGWPDFGLGETRVAFKLRKDKFHYMALADDRQRIMPMPDDRLPPRGQPLAYPEAVL 215

Query: 368 FVDPIESEFAGQ 403
            VDPI  +  G+
Sbjct: 216 LVDPINPDLRGE 227


>ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355492757|gb|AES73960.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 651

 Score =  177 bits (448), Expect = 1e-42
 Identities = 82/132 (62%), Positives = 104/132 (78%)
 Frame = +2

Query: 8   GVFDIVKRTDYRVILQNENQLEISFTRTWNSSQKGTLVPLNIDTRFVMLEGSHGFYTYSI 187
           G FD++K T ++VIL++E+Q+E+SFTRTW++S +G LVPLNID RF+ML G  GFY+Y+I
Sbjct: 74  GKFDVIKATTFKVILEDEDQVELSFTRTWDASLEGKLVPLNIDKRFIMLRGCSGFYSYAI 133

Query: 188 YEHMEGWPDFNLNETRVAFKLNEDLFRNMAVDQNRQRRMPLSDDRNRNRGQPLAYPEAVR 367
           YEH+E WP FNL+ETR+AFKL +D F  MA+  NRQR MPL DDR   RGQ LAYPEAV 
Sbjct: 134 YEHLEDWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRVAPRGQALAYPEAVL 193

Query: 368 FVDPIESEFAGQ 403
            V+PIE E  G+
Sbjct: 194 LVNPIEPELKGE 205