BLASTX nr result

ID: Coptis23_contig00027547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027547
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    99   3e-19
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    98   6e-19
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    97   1e-18
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    96   2e-18
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              96   2e-18

>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/84 (52%), Positives = 62/84 (73%)
 Frame = +3

Query: 6   VSCLKIFGSIAYSLIESSARSKLDKKSEKCIFVGYSDETKGYRLYNPETRKLIIRRDVIF 185
           VS LK+FGS+AY+LIES  RSKLD+KS KCIF+GY  ++KGY+LYNP + K+I+ R+V+F
Sbjct: 596 VSHLKVFGSVAYTLIESHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVF 655

Query: 186 DENSFWQWEAEQNQHVPFVEDASE 257
           DE + W W   ++  +  +   SE
Sbjct: 656 DEKASWTWRVSEDGALVEISSESE 679


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 43/84 (51%), Positives = 62/84 (73%)
 Frame = +3

Query: 6   VSCLKIFGSIAYSLIESSARSKLDKKSEKCIFVGYSDETKGYRLYNPETRKLIIRRDVIF 185
           VS LK+FGS+AY+LI+S  RSKLD+KS KCIF+GY  ++KGY+LYNP + K+I+ R+V+F
Sbjct: 647 VSHLKVFGSVAYTLIDSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVF 706

Query: 186 DENSFWQWEAEQNQHVPFVEDASE 257
           DE + W W   ++  +  +   SE
Sbjct: 707 DEKASWTWRVSEDGALVEISSESE 730


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/77 (59%), Positives = 53/77 (68%)
 Frame = +3

Query: 6   VSCLKIFGSIAYSLIESSARSKLDKKSEKCIFVGYSDETKGYRLYNPETRKLIIRRDVIF 185
           VS L++FG IAYS I    R KLD KSEKCIFVGYS+ +K YRLYNP ++K+II RDV F
Sbjct: 660 VSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVGYSENSKAYRLYNPISKKVIISRDVKF 719

Query: 186 DENSFWQWEAEQNQHVP 236
           DE   WQW A      P
Sbjct: 720 DEAKLWQWNAPNEDQNP 736


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
 Frame = +3

Query: 6   VSCLKIFGSIAYSLIESSARSKLDKKSEKCIFVGYSDETKGYRLYNPETRKLIIRRDVIF 185
           VS L++FGSIA++ +    RSKLD KSEK IF+GY + +KGY+LYNP+T+K II R+++F
Sbjct: 691 VSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVF 750

Query: 186 DENSFWQW---EAEQNQHVPFVEDASEPT 263
           DE   W W   E + N    F ED  EPT
Sbjct: 751 DEEGEWDWNSNEEDYNFFPHFEEDEPEPT 779


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
 Frame = +3

Query: 6   VSCLKIFGSIAYSLIESSARSKLDKKSEKCIFVGYSDETKGYRLYNPETRKLIIRRDVIF 185
           VS L++FGSIA++ +    RSKLD KSEK IF+GY + +KGY+LYNP+T+K II R+++F
Sbjct: 630 VSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVF 689

Query: 186 DENSFWQW---EAEQNQHVPFVEDASEPT 263
           DE   W W   E + N    F ED  EPT
Sbjct: 690 DEEGEWDWNSNEEDYNFFPHFEEDEPEPT 718


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