BLASTX nr result

ID: Coptis23_contig00027542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027542
         (1210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329633.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-28
ref|XP_002531652.1| conserved hypothetical protein [Ricinus comm...   127   7e-27
ref|XP_002325055.1| predicted protein [Populus trichocarpa] gi|2...   121   3e-25
ref|XP_003555741.1| PREDICTED: uncharacterized protein LOC100777...   117   4e-24
ref|XP_003610121.1| hypothetical protein MTR_4g128160 [Medicago ...   112   1e-22

>ref|XP_002329633.1| predicted protein [Populus trichocarpa] gi|222870514|gb|EEF07645.1|
            predicted protein [Populus trichocarpa]
          Length = 301

 Score =  130 bits (326), Expect = 9e-28
 Identities = 105/265 (39%), Positives = 145/265 (54%), Gaps = 8/265 (3%)
 Frame = +2

Query: 266  DHEFQEDSEADEALSFCDLPLSGEYCVDNSDSKQNHDLQTSRDQELFEFFNVVSTGTLSS 445
            D +  ++ E +EALS CD PL G        +  N    +S   E FEFF+ VS+  +SS
Sbjct: 18   DRDRDQEEEEEEALSLCDFPLQGRDKESPEIAAHNSARPSSEPAEFFEFFSDVSS-EMSS 76

Query: 446  AEDIVFCGKVFPYRSPPLSNITNKTTQCIEDQRLDIPRKSFLHRKSGSLNDVQRSQS--- 616
            AEDI+F GK+ P+  P  +       Q  EDQ+    R SF  R+  SL+++Q S S   
Sbjct: 77   AEDIIFHGKLVPFIEPYFT----PQNQSKEDQQ----RFSF-RRRCDSLSELQSSASRSN 127

Query: 617  STKER--LTRSTKSLDYGKLHRNSSSKLTRTDSLVQSDERISSGTCFGKCKFSEQRTPSA 790
            STK    L R+++SLDY  L R  SSK    +  ++    + S    G+ K    RT S 
Sbjct: 128  STKNNIALMRNSRSLDYRNLERFPSSKKFSPELDIERSSSLKSIHARGEVK----RTTS- 182

Query: 791  RPRRRVLMFGLVKAPTEMELKDIRNRQSRRMPT-PLFPAF--DGEETVSVKRVGGKGTWR 961
            +PR  +LMFG+VK PTEM+L DI++RQ RR  +  +FP    DG++    +    KG+ R
Sbjct: 183  KPRWYLLMFGVVKPPTEMDLSDIKSRQVRRNSSMTMFPPVDTDGKKAPVSQSSISKGSCR 242

Query: 962  LLRVLSCKGEANGVITASLSCTPQV 1036
            LLRVLSCK  A+ V  A+   TPQV
Sbjct: 243  LLRVLSCKDPAS-VAVATSFLTPQV 266


>ref|XP_002531652.1| conserved hypothetical protein [Ricinus communis]
            gi|223528710|gb|EEF30722.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 244

 Score =  127 bits (318), Expect = 7e-27
 Identities = 91/253 (35%), Positives = 135/253 (53%), Gaps = 2/253 (0%)
 Frame = +2

Query: 278  QEDSEADEALSFCDLPLSGEYCVDNSDSKQNHDLQTSRDQELFEFFNVVSTGTLSSAEDI 457
            +ED E +EALS CDLPL  +  +    S+ +    +S   ELFEFF+  S+  + SAEDI
Sbjct: 13   EEDEEEEEALSLCDLPLEDDNEIPEMASRSHSRRSSSEPSELFEFFSNFSS-EMCSAEDI 71

Query: 458  VFCGKVFPYR--SPPLSNITNKTTQCIEDQRLDIPRKSFLHRKSGSLNDVQRSQSSTKER 631
            +FCGK+ P++  SPP            + + +   R+S        L+    S+S++   
Sbjct: 72   IFCGKLIPFKDLSPPHQQ---------DKRHISFRRRS---ESLSGLHSSSVSRSNSINN 119

Query: 632  LTRSTKSLDYGKLHRNSSSKLTRTDSLVQSDERISSGTCFGKCKFSEQRTPSARPRRRVL 811
            + R+++SLDY +L R  +SK T       S ER SS       + +  +    +PR  VL
Sbjct: 120  MMRNSRSLDYSRLERFPTSKTTTESD--NSMERNSS------LRSNMAKRTVVKPRWYVL 171

Query: 812  MFGLVKAPTEMELKDIRNRQSRRMPTPLFPAFDGEETVSVKRVGGKGTWRLLRVLSCKGE 991
            MFG+VK PTEM L+DI++RQ RR    +       +TV    V GKG+ +LL+VLSC+  
Sbjct: 172  MFGVVKPPTEMGLRDIKSRQVRRNSLNMMLPPPVADTVKKPPV-GKGSCKLLKVLSCRDP 230

Query: 992  ANGVITASLSCTP 1030
            A+  +T  L C P
Sbjct: 231  ASVAVTTPL-CVP 242


>ref|XP_002325055.1| predicted protein [Populus trichocarpa] gi|222866489|gb|EEF03620.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  121 bits (304), Expect = 3e-25
 Identities = 101/262 (38%), Positives = 143/262 (54%), Gaps = 8/262 (3%)
 Frame = +2

Query: 254  KQKGDHEFQEDSEADEALSFCDLPLSGEYCVDNSDSKQNHDLQTSRDQELFEFFNVVSTG 433
            +Q+  HE  E  E +EALS CD PL G      + +  +    +S   E FEFF+ +S+ 
Sbjct: 14   EQEHGHE-GEGEEEEEALSLCDFPLEGRNEESPNIAFHSGARSSSEPAEFFEFFSDLSS- 71

Query: 434  TLSSAEDIVFCGKVFPYRSPPLSNITNKTTQCIEDQRLDIPRKSFLHRKSGSLNDVQRS- 610
             + SAEDI+F GK+ P + P  +       Q  ED++    R SF  R+  SL+++Q S 
Sbjct: 72   EMRSAEDIIFRGKLVPVKEPYFT----PQNQSKEDKQ----RISF-RRRCESLSELQSSV 122

Query: 611  --QSSTKER--LTRSTKSLDYGKLHRNSSSKLTRTDSLVQSDERISSGTCFGKCKFSEQR 778
               SS+K    L R+++SLDY KL R SSSK   ++  +   ER SS       K   ++
Sbjct: 123  CRSSSSKNNIGLMRNSRSLDYRKLERFSSSKKCSSELDI---ERSSSSLKSIHAKSDVKK 179

Query: 779  TPSARPRRRVLMFGLVKAPTEMELKDIRNRQSRR-MPTPLFPAF--DGEETVSVKRVGGK 949
            T S +PR  +LMFG+VK PTEM L DI++RQ RR     +FP    DG++    +    K
Sbjct: 180  TGS-KPRWYLLMFGVVKPPTEMNLSDIKSRQGRRNYSVSMFPPVDTDGKKAPVNQSCISK 238

Query: 950  GTWRLLRVLSCKGEANGVITAS 1015
            G+ RLLRVLSCK  A+  +  S
Sbjct: 239  GSCRLLRVLSCKDPASVAVATS 260


>ref|XP_003555741.1| PREDICTED: uncharacterized protein LOC100777782 [Glycine max]
          Length = 254

 Score =  117 bits (294), Expect = 4e-24
 Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 17/271 (6%)
 Frame = +2

Query: 254  KQKGDHEFQEDSEAD--EALSFCDLPL---SGEYCVDNSDSKQNHDLQTSRDQ--ELFEF 412
            K   D E QE+ E +  EALS CDLPL   S    +D+   K+     +  D   E+F  
Sbjct: 2    KDSDDMESQEEEEEEREEALSLCDLPLNRNSRTPSLDDMSFKKILRPSSLPDHAGEIFNG 61

Query: 413  FNVVSTGTLSSAEDIVFCGKVFPYRSP-PLSNITNKTTQCIEDQRLDIPRKSFLHRKSGS 589
            F+  S+  +  A+DI+FCGK+ P+++  PL N+        E+++    R     R+S S
Sbjct: 62   FSSSSSSDMCPADDIIFCGKLVPFKAEQPLKNLI-----AAEEEKSPARR-----RRSES 111

Query: 590  LNDVQRSQS-----STKERLTRSTKSLDYGKLHRNSSSKLTRTDS---LVQSDERISSGT 745
            L+ V RS S      ++  + R++KSLDY +L  +++ ++ R  S   +V  +  +   T
Sbjct: 112  LSSVTRSNSVSTFTGSRHLMMRNSKSLDYSRLRESAAPEVDRNSSSRSVVPPEAAVKKAT 171

Query: 746  CFGKCKFSEQRTPSARPRRRVLMFGLVKAPTEMELKDIRNRQSRRMP-TPLFPAFDGEET 922
                           +PR   LMFG +K P EMEL D++NRQ RR P + +F   D    
Sbjct: 172  ---------------KPRWYSLMFGTMKIPPEMELSDMKNRQVRRNPSSTMFLTADSGGK 216

Query: 923  VSVKRVGGKGTWRLLRVLSCKGEANGVITAS 1015
            ++V R  GK +WR+L+ LSCK  ++  +T S
Sbjct: 217  MAVNRSHGKVSWRILKALSCKDHSSVAVTTS 247


>ref|XP_003610121.1| hypothetical protein MTR_4g128160 [Medicago truncatula]
            gi|355511176|gb|AES92318.1| hypothetical protein
            MTR_4g128160 [Medicago truncatula]
          Length = 270

 Score =  112 bits (281), Expect = 1e-22
 Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 11/255 (4%)
 Frame = +2

Query: 290  EADEALSFCDLPL---SGEYCVDNSDSKQNHDLQTS--RDQELFEFFNVVSTGTLSSAED 454
            E +EALS CDLPL   S E   D   S  N    TS     E F  F+  S+  +  A+D
Sbjct: 23   EEEEALSLCDLPLNENSSESLEDKLFSINNIQRPTSLPESNEFFNGFSSSSSSDMCPADD 82

Query: 455  IVFCGKVFPYRSPPLSNITNKTTQCIEDQRLDIPRKSFLHRKSGSLNDVQRSQS----ST 622
            I+FCGK+ P++   + N        +E  +    RK+   R+S S++ + RS S     +
Sbjct: 83   IIFCGKLMPFKE--IFNDQRNENLNVESNK---SRKN--RRRSESVSLMIRSNSISGGGS 135

Query: 623  KERLTRSTKSLDYGKLHRNSSS-KLTRTDSLVQSDERISSGTCFGKCKFSEQRTPSARPR 799
               + R+++SL+Y KL   SSS  +++   + ++    S+ +  G  K       + +PR
Sbjct: 136  NHLMMRNSRSLNYCKLREYSSSFPISKVPEVDRNSSIRSAASMEGVAK------KAMKPR 189

Query: 800  RRVLMFGLVKAPTEMELKDIRNRQSRRMPT-PLFPAFDGEETVSVKRVGGKGTWRLLRVL 976
               LMFG +K P EMEL DI+NRQ RR P+  +FPA +    +++ R  GK +W++L+ L
Sbjct: 190  WYSLMFGKMKNPPEMELNDIKNRQVRRNPSKSMFPASETSGNLNLNRSSGKVSWKILKAL 249

Query: 977  SCKGEANGVITASLS 1021
            SCK   +  +T + S
Sbjct: 250  SCKDHNSVAVTTTFS 264


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