BLASTX nr result

ID: Coptis23_contig00027538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027538
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50953.1| T1.1 [Malus x robusta]                                170   1e-40
ref|XP_002299130.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
ref|XP_002271561.1| PREDICTED: uncharacterized protein LOC100244...   164   5e-39
ref|XP_002304873.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|XP_002304874.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38

>emb|CCH50953.1| T1.1 [Malus x robusta]
          Length = 316

 Score =  170 bits (430), Expect = 1e-40
 Identities = 76/107 (71%), Positives = 88/107 (82%)
 Frame = -3

Query: 322 FGFLLIGLWHLFNHVKFHALHPKSYVSSPWFKTQIVKYLELYLIMGACTLSIAMELFIGP 143
           FGFLLIGLWHLFNH+K H   P SY++  WF T   KYLEL+LIMG  + SIAMELFIGP
Sbjct: 12  FGFLLIGLWHLFNHIKLHLNQPNSYIAPAWFPTSKFKYLELFLIMGGSSASIAMELFIGP 71

Query: 142 ERHQPFDSDGTIPSNHLHNFEHSSISLSFFIYATFAIVLDKIKPEVK 2
           E+HQPFD DGTIP+NHLHNFEHSSIS++F +YA FAIVLDKI P+ +
Sbjct: 72  EKHQPFDDDGTIPTNHLHNFEHSSISMAFLVYAAFAIVLDKIAPKAQ 118


>ref|XP_002299130.1| predicted protein [Populus trichocarpa] gi|222846388|gb|EEE83935.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  167 bits (424), Expect = 6e-40
 Identities = 75/107 (70%), Positives = 90/107 (84%)
 Frame = -3

Query: 322 FGFLLIGLWHLFNHVKFHALHPKSYVSSPWFKTQIVKYLELYLIMGACTLSIAMELFIGP 143
           F FL +GLWHLF+H+K HA  P SY SSPWF T   +YLEL+LIM + +LSI+MELFIGP
Sbjct: 12  FAFLALGLWHLFSHIKLHAQQPNSYTSSPWFPTSKFRYLELFLIMLSSSLSISMELFIGP 71

Query: 142 ERHQPFDSDGTIPSNHLHNFEHSSISLSFFIYATFAIVLDKIKPEVK 2
           E HQPFDSDGTIPSNHLHNFEHSSIS++FF+YA FAI+LD+I P+ +
Sbjct: 72  EMHQPFDSDGTIPSNHLHNFEHSSISMTFFVYAVFAILLDRIGPKAQ 118


>ref|XP_002271561.1| PREDICTED: uncharacterized protein LOC100244332 [Vitis vinifera]
           gi|296085464|emb|CBI29196.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  164 bits (416), Expect = 5e-39
 Identities = 73/107 (68%), Positives = 86/107 (80%)
 Frame = -3

Query: 322 FGFLLIGLWHLFNHVKFHALHPKSYVSSPWFKTQIVKYLELYLIMGACTLSIAMELFIGP 143
           FGFLLIGLWHLFNH+K H  HP SY S PWF T  ++YLEL+LIM    +SIAMELFIGP
Sbjct: 12  FGFLLIGLWHLFNHIKLHYQHPNSYTSPPWFPTAKIRYLELFLIMVGSCISIAMELFIGP 71

Query: 142 ERHQPFDSDGTIPSNHLHNFEHSSISLSFFIYATFAIVLDKIKPEVK 2
           ++HQPFD DGTIPSNHLHNFEHSSIS++F +Y  F+IVLD +  + K
Sbjct: 72  QKHQPFDVDGTIPSNHLHNFEHSSISMAFLVYGAFSIVLDHLGSKAK 118


>ref|XP_002304873.1| predicted protein [Populus trichocarpa] gi|222842305|gb|EEE79852.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  164 bits (415), Expect = 7e-39
 Identities = 71/107 (66%), Positives = 89/107 (83%)
 Frame = -3

Query: 322 FGFLLIGLWHLFNHVKFHALHPKSYVSSPWFKTQIVKYLELYLIMGACTLSIAMELFIGP 143
           F FL +GLWHLF+H+K HA  P SY SSPWF T  ++YLEL+LIM   ++S++MELFIGP
Sbjct: 12  FAFLALGLWHLFSHIKLHAQQPNSYTSSPWFPTSRLRYLELFLIMLGSSISVSMELFIGP 71

Query: 142 ERHQPFDSDGTIPSNHLHNFEHSSISLSFFIYATFAIVLDKIKPEVK 2
             HQPFD+DGTIPSNHLHNFEHSSIS++FF+YA FAI+LD+I P+ +
Sbjct: 72  RNHQPFDTDGTIPSNHLHNFEHSSISITFFVYAAFAILLDRIGPKAQ 118


>ref|XP_002304874.1| predicted protein [Populus trichocarpa] gi|222842306|gb|EEE79853.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  162 bits (411), Expect = 2e-38
 Identities = 72/105 (68%), Positives = 88/105 (83%)
 Frame = -3

Query: 316 FLLIGLWHLFNHVKFHALHPKSYVSSPWFKTQIVKYLELYLIMGACTLSIAMELFIGPER 137
           F ++GLWHLFNH+K ++L P SY+SSPWF T  ++YLELYLIM   ++SI+MELFIGPE+
Sbjct: 14  FFILGLWHLFNHIKLYSLRPNSYISSPWFPTTKLRYLELYLIMLGSSISISMELFIGPEK 73

Query: 136 HQPFDSDGTIPSNHLHNFEHSSISLSFFIYATFAIVLDKIKPEVK 2
           H PFD DGTIPSNHL NFEHS IS+SFF+YATFAI+LDKI  E +
Sbjct: 74  HHPFDVDGTIPSNHLRNFEHSLISMSFFVYATFAILLDKISSEAQ 118


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