BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027529
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding prote...   198   1e-48
ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding prote...   196   5e-48
ref|XP_002515546.1| protein with unknown function [Ricinus commu...   184   3e-44
ref|XP_004138734.1| PREDICTED: uncharacterized RNA-binding prote...   180   3e-43
gb|AFK47520.1| unknown [Lotus japonicus]                              180   3e-43

>ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|297743402|emb|CBI36269.3| unnamed protein
           product [Vitis vinifera]
          Length = 150

 Score =  198 bits (504), Expect = 1e-48
 Identities = 93/150 (62%), Positives = 99/150 (66%), Gaps = 3/150 (2%)
 Frame = -3

Query: 755 MNRPGDWNCRSCQHHNFSRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGDWY 576
           M+RPGDWNCRSCQH NF RRDSCQRC                            RPGDWY
Sbjct: 1   MSRPGDWNCRSCQHMNFQRRDSCQRCGDPKSGGGDFGSFGGRGGSSFGFTGSDVRPGDWY 60

Query: 575 CAAGNCGAHNFASRSSCFKCGAFKDESTGGFDGDMP---XXXXXXXXXXXGWKSGDWICS 405
           C AGNCGAHNFASRS+CFKCGAFKDES GG+D DM               GWKSGDWICS
Sbjct: 61  CNAGNCGAHNFASRSNCFKCGAFKDESAGGYDSDMSRSRGFGFGGGSGRSGWKSGDWICS 120

Query: 404 RSGCSEHNFASRMECFRCNAPRDSGSKSPY 315
           RSGC+EHNFASRMECFRCNAPRD  +K+ Y
Sbjct: 121 RSGCNEHNFASRMECFRCNAPRDLSNKTSY 150


>ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|296082008|emb|CBI21013.3| unnamed protein
           product [Vitis vinifera]
          Length = 158

 Score =  196 bits (498), Expect = 5e-48
 Identities = 91/158 (57%), Positives = 101/158 (63%), Gaps = 9/158 (5%)
 Frame = -3

Query: 755 MNRPGDWNCRSCQHHNFSRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGDWY 576
           M+RPGDWNCRSCQ+ NF RRDSCQRC                            RPGDWY
Sbjct: 1   MSRPGDWNCRSCQYLNFQRRDSCQRCGEPRPGDRGDYGGFSRGSSSFGFTGPDVRPGDWY 60

Query: 575 CAAGNCGAHNFASRSSCFKCGAFKDESTGGFDGDMPXXXXXXXXXXXG---------WKS 423
           C  GNCGAHNFASRSSCFKCG  KDES+GG++GDM                      WKS
Sbjct: 61  CTIGNCGAHNFASRSSCFKCGGLKDESSGGYEGDMSRPRGFGFGSGGSSGSGIGRSGWKS 120

Query: 422 GDWICSRSGCSEHNFASRMECFRCNAPRDSGSKSPYAT 309
           GDWIC+RSGC+EHNFASRMECFRCNAPRDSG+KS Y++
Sbjct: 121 GDWICNRSGCNEHNFASRMECFRCNAPRDSGNKSSYSS 158


>ref|XP_002515546.1| protein with unknown function [Ricinus communis]
           gi|223545490|gb|EEF46995.1| protein with unknown
           function [Ricinus communis]
          Length = 154

 Score =  184 bits (466), Expect = 3e-44
 Identities = 90/154 (58%), Positives = 97/154 (62%), Gaps = 7/154 (4%)
 Frame = -3

Query: 755 MNRPGDWNCRSCQHHNFSRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--PGD 582
           M+RPGDWNCRSCQH NF RRDSCQRC                               PGD
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCREPRPGERGDHYSSFGGRGSSSFGFTGPDVRPGD 60

Query: 581 WYCAAGNCGAHNFASRSSCFKCGAFKDESTGGFDGDMP----XXXXXXXXXXXGWKSGDW 414
           WYC  GNCGAHNFASRSSCFKCGA KDES+GGFDG+M                GWKSGDW
Sbjct: 61  WYCTFGNCGAHNFASRSSCFKCGASKDESSGGFDGEMSRMRGFGFGSGSTSRSGWKSGDW 120

Query: 413 ICSRSGCSEHNFASRMECFRCNAPRD-SGSKSPY 315
           IC+RSGC+EHNFASR EC+RCNAPRD S + S Y
Sbjct: 121 ICTRSGCNEHNFASRTECYRCNAPRDLSAANSSY 154


>ref|XP_004138734.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Cucumis sativus] gi|449525766|ref|XP_004169887.1|
           PREDICTED: uncharacterized RNA-binding protein
           C17H9.04c-like [Cucumis sativus]
          Length = 155

 Score =  180 bits (457), Expect = 3e-43
 Identities = 87/155 (56%), Positives = 93/155 (60%), Gaps = 7/155 (4%)
 Frame = -3

Query: 755 MNRPGDWNCRSCQHHNFSRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---PG 585
           M+RPGDWNCRSC H NF RRDSCQRC                                PG
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPG 60

Query: 584 DWYCAAGNCGAHNFASRSSCFKCGAFKDE-STGGFDGDMPXXXXXXXXXXXG---WKSGD 417
           DWYC   NCGAHNFASRS CFKCGA KDE S   +DGD+P               WKSGD
Sbjct: 61  DWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRPGWKSGD 120

Query: 416 WICSRSGCSEHNFASRMECFRCNAPRDSGSKSPYA 312
           WIC+RS C+EHNFASR ECFRCNAPRDS SKSPY+
Sbjct: 121 WICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS 155


>gb|AFK47520.1| unknown [Lotus japonicus]
          Length = 150

 Score =  180 bits (457), Expect = 3e-43
 Identities = 86/147 (58%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
 Frame = -3

Query: 755 MNRPGDWNCRSCQHHNFSRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---PG 585
           M+RPGDWNCRSCQH NF RRDSCQRC                                PG
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRIDFGAFGGGIRGGSSFGLSGSDVRPG 60

Query: 584 DWYCAAGNCGAHNFASRSSCFKCGAFKDESTGGFDGDM---PXXXXXXXXXXXGWKSGDW 414
           DWYCAA NCGAHNFASRSSCFKCGAFKD+  GGF  D+               GWKSGDW
Sbjct: 61  DWYCAAANCGAHNFASRSSCFKCGAFKDDLVGGFSSDILRSRGGFGGGGGGRPGWKSGDW 120

Query: 413 ICSRSGCSEHNFASRMECFRCNAPRDS 333
           ICSRSGC+EHNFASRMECF+C+APRD+
Sbjct: 121 ICSRSGCNEHNFASRMECFKCSAPRDT 147