BLASTX nr result

ID: Coptis23_contig00027495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027495
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30693.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002266263.1| PREDICTED: uncharacterized protein LOC100253...    67   2e-09
ref|XP_002305742.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002320413.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002533963.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>emb|CBI30693.3| unnamed protein product [Vitis vinifera]
          Length = 792

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/97 (40%), Positives = 48/97 (49%)
 Frame = +3

Query: 216 DRPNPARHRHSLDGFRNGDVLDQEARSFMSSNVRNSGDLNFEKPQFFREVYQDSPDVYSS 395
           D P+      +LD FR    LDQE RS   S     G+L+    Q  +   Q   +V   
Sbjct: 655 DIPHINSQEDTLDSFRLDQGLDQEFRSLEFSKGPIDGNLSMNNEQILKADDQVDSNVTFL 714

Query: 396 QFPLAPPLPKSPSESWLWRTLPSVSSKNSAAFHSRKQ 506
           Q P+ P LPKSPSESWLWRT+        + FH RKQ
Sbjct: 715 QSPVPPALPKSPSESWLWRTVSLQKPHQRSKFHPRKQ 751


>ref|XP_002266263.1| PREDICTED: uncharacterized protein LOC100253264 [Vitis vinifera]
          Length = 672

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/97 (40%), Positives = 48/97 (49%)
 Frame = +3

Query: 216 DRPNPARHRHSLDGFRNGDVLDQEARSFMSSNVRNSGDLNFEKPQFFREVYQDSPDVYSS 395
           D P+      +LD FR    LDQE RS   S     G+L+    Q  +   Q   +V   
Sbjct: 535 DIPHINSQEDTLDSFRLDQGLDQEFRSLEFSKGPIDGNLSMNNEQILKADDQVDSNVTFL 594

Query: 396 QFPLAPPLPKSPSESWLWRTLPSVSSKNSAAFHSRKQ 506
           Q P+ P LPKSPSESWLWRT+        + FH RKQ
Sbjct: 595 QSPVPPALPKSPSESWLWRTVSLQKPHQRSKFHPRKQ 631


>ref|XP_002305742.1| predicted protein [Populus trichocarpa] gi|222848706|gb|EEE86253.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 43/71 (60%)
 Frame = +3

Query: 270 DVLDQEARSFMSSNVRNSGDLNFEKPQFFREVYQDSPDVYSSQFPLAPPLPKSPSESWLW 449
           D+++  A++ +  +     ++N +  Q  +E    +      Q PLAP LPKSPSESWLW
Sbjct: 609 DLMEDYAKALVCISATTEENVNIDGDQISKEDGTGNVKNSLVQSPLAPILPKSPSESWLW 668

Query: 450 RTLPSVSSKNS 482
           RTLPS SS+NS
Sbjct: 669 RTLPSFSSQNS 679


>ref|XP_002320413.1| predicted protein [Populus trichocarpa] gi|222861186|gb|EEE98728.1|
            predicted protein [Populus trichocarpa]
          Length = 692

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 41/206 (19%)
 Frame = +3

Query: 12   AKSSSLDMSGMVGFKENDSLILTEHLEKEDMLAVSCSG-DLHNLDLPQEKKISKPKFSEV 188
            + SSS D  G+    ++D  IL ++ E E+   V+ S  D  +L    EKK  +P   E 
Sbjct: 449  SNSSSSDARGLSECSKDDVEILVKNREIEETDDVNSSLLDSKHLSTVDEKKKLRPDSLES 508

Query: 189  GXXXXXXXXDRPNPARHRHSLDGFRNGD------------------VLDQEARS------ 296
                     D+     H   +DG R  +                   +D E+RS      
Sbjct: 509  VDSCFLSLSDKSIHDVHMAVMDGSRQDEDNMQVSNTLTSPKVDKDGKIDLESRSDKKLGN 568

Query: 297  -------FMSSN--VRNSGDLNFEKPQFFREVYQDSPDVYSSQFPLAPPLPKSPSESWLW 449
                      SN  V  +G ++ E  Q  +   ++S     +Q  L PPLPKSPSESWL 
Sbjct: 569  LESSHVFIQDSNGVVAGNGRIDLESQQCRKLSNKESSIGCYTQLLLPPPLPKSPSESWLK 628

Query: 450  RTLPSVSSKNSAA-------FHSRKQ 506
            RTLP VSS+NS++        HSR Q
Sbjct: 629  RTLPIVSSRNSSSRSPLGMHLHSRVQ 654


>ref|XP_002533963.1| conserved hypothetical protein [Ricinus communis]
           gi|223526060|gb|EEF28419.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 612

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = +3

Query: 276 LDQEARSFMSSNVRNSGDLNFEKPQFFR--EVYQDSPDVYSSQFPLAPPLPKSPSESWLW 449
           L +E+ + +  +    G++N E  Q  +  +   +   +   Q P+ P LPK+PSESWLW
Sbjct: 486 LSKESMALVCISAATEGNVNIESDQISKRDDTGSEKTSLVLVQPPIPPLLPKTPSESWLW 545

Query: 450 RTLPSVSSKNSAA 488
           RTLPS+SS+N ++
Sbjct: 546 RTLPSISSQNQSS 558


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