BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027491
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...   120   5e-25
ref|NP_178132.1| pentatricopeptide repeat-containing protein [Ar...   119   1e-24
dbj|BAC43646.1| unknown protein [Arabidopsis thaliana] gi|289509...   119   1e-24
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   116   1e-23
gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thal...   115   1e-23

>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Vitis vinifera]
          Length = 405

 Score =  120 bits (302), Expect = 5e-25
 Identities = 56/101 (55%), Positives = 75/101 (74%)
 Frame = -1

Query: 1095 DMAKNIYFSLHRKDYKPNCKIYQTMVHYLCKTGDFDLACTLSKYSMSKNWFPSVDTVCKL 916
            +MAK +Y +LH K YKPN KIYQTM+HYLCK G+FD+A T+ K  M++NW  +VDT+ KL
Sbjct: 303  EMAKKVYSALHGKGYKPNVKIYQTMIHYLCKGGEFDMAYTMCKDCMNRNWSLNVDTIYKL 362

Query: 915  LEGLSKKPKDVEAKTIMELIRKRVPPFSVKEIGTFENILSR 793
            LEGL    +  +AK I+ L RKRVP FS  ++G FE++LS+
Sbjct: 363  LEGLKGNGEIDKAKVILRLARKRVPSFSKNQLGVFESVLSK 403


>ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g80150, mitochondrial; Flags: Precursor
            gi|332198242|gb|AEE36363.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 397

 Score =  119 bits (298), Expect = 1e-24
 Identities = 55/99 (55%), Positives = 76/99 (76%)
 Frame = -1

Query: 1095 DMAKNIYFSLHRKDYKPNCKIYQTMVHYLCKTGDFDLACTLSKYSMSKNWFPSVDTVCKL 916
            DMA+ +Y ++H K YKPN KIYQTM+HYLCK G+FDLA T+ K  M K W+P++DTV  L
Sbjct: 299  DMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEML 358

Query: 915  LEGLSKKPKDVEAKTIMELIRKRVPPFSVKEIGTFENIL 799
            L+GL KK +  +AK+IMEL+ +RVPPF  K++ + ++IL
Sbjct: 359  LKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397


>dbj|BAC43646.1| unknown protein [Arabidopsis thaliana] gi|28950987|gb|AAO63417.1|
            At1g80150 [Arabidopsis thaliana]
          Length = 397

 Score =  119 bits (298), Expect = 1e-24
 Identities = 55/99 (55%), Positives = 76/99 (76%)
 Frame = -1

Query: 1095 DMAKNIYFSLHRKDYKPNCKIYQTMVHYLCKTGDFDLACTLSKYSMSKNWFPSVDTVCKL 916
            DMA+ +Y ++H K YKPN KIYQTM+HYLCK G+FDLA T+ K  M K W+P++DTV  L
Sbjct: 299  DMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEML 358

Query: 915  LEGLSKKPKDVEAKTIMELIRKRVPPFSVKEIGTFENIL 799
            L+GL KK +  +AK+IMEL+ +RVPPF  K++ + ++IL
Sbjct: 359  LKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Cucumis sativus]
            gi|449484169|ref|XP_004156805.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  116 bits (290), Expect = 1e-23
 Identities = 53/102 (51%), Positives = 74/102 (72%)
 Frame = -1

Query: 1095 DMAKNIYFSLHRKDYKPNCKIYQTMVHYLCKTGDFDLACTLSKYSMSKNWFPSVDTVCKL 916
            DMAK +Y +LH   YKPN KIYQTM+HYLCK+ DF+LA T+ K +M+KNWFP++DT+  L
Sbjct: 298  DMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSL 357

Query: 915  LEGLSKKPKDVEAKTIMELIRKRVPPFSVKEIGTFENILSRT 790
            L+GL+K  +  +A+ I+ L RKRVPPFS  ++      L+ +
Sbjct: 358  LKGLNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 399


>gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
          Length = 419

 Score =  115 bits (289), Expect = 1e-23
 Identities = 53/88 (60%), Positives = 69/88 (78%)
 Frame = -1

Query: 1095 DMAKNIYFSLHRKDYKPNCKIYQTMVHYLCKTGDFDLACTLSKYSMSKNWFPSVDTVCKL 916
            DMA+ +Y ++H K YKPN KIYQTM+HYLCK G+FDLA T+ K  M K W+P++DTV  L
Sbjct: 299  DMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEML 358

Query: 915  LEGLSKKPKDVEAKTIMELIRKRVPPFS 832
            L+GL KK +  +AK+IMEL+ +RVPPFS
Sbjct: 359  LKGLVKKGQLDQAKSIMELVHRRVPPFS 386