BLASTX nr result

ID: Coptis23_contig00027488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027488
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298920.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002298920.1| predicted protein [Populus trichocarpa] gi|222846178|gb|EEE83725.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 17/133 (12%)
 Frame = +3

Query: 75  MASMLSENVNVLPYNDLEFEGMEIIETDVFLMEKLLEESQIE-DTEDERLGSVMQSLEAE 251
           MAS+L EN+++   +D +F+G+E  + +  LM  LLEESQ + ++ +ERL SV+QSLEAE
Sbjct: 1   MASLLPENISIKTGDD-DFKGIEGYDDNALLMS-LLEESQGDHESNEERLRSVIQSLEAE 58

Query: 252 INQS-----KDVLL---------ESTHDCFRYSASNNIYDSLDWTDMEMASTSFTD-DIG 386
           IN S      D  +         E T + F+ +   ++    +  DME+  +S +D D+ 
Sbjct: 59  INPSIMSDGYDTAMDPAEMPRDGEDTDELFKTAEMESLGLDFELVDMEVVPSSPSDHDMN 118

Query: 387 KWYAYS-MENEVV 422
            WY     EN++V
Sbjct: 119 YWYNMEPSENDIV 131


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