BLASTX nr result

ID: Coptis23_contig00027484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027484
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73939.1| hypothetical protein VITISV_031601 [Vitis vinifera]   119   2e-24
ref|XP_002517951.1| protein with unknown function [Ricinus commu...   103   1e-19
ref|XP_002319910.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-13
ref|XP_002305014.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-08

>emb|CAN73939.1| hypothetical protein VITISV_031601 [Vitis vinifera]
          Length = 1452

 Score =  119 bits (297), Expect = 2e-24
 Identities = 123/407 (30%), Positives = 173/407 (42%), Gaps = 21/407 (5%)
 Frame = +3

Query: 36   SSSTLSNATLQHKVEKI-TRAASESPSCFSERSVVYLDDVMELQ-PNVKDDKQKDQRLFV 209
            S  ++  A L+ + E++  +++SES   F E  VVYLDD+ E Q P  KD   +DQRLF+
Sbjct: 1077 SHCSIDAAALEQEKERVDAKSSSESSYQFPEEEVVYLDDIEEFQSPRTKDSSFQDQRLFM 1136

Query: 210  FTG----NNPSVRKDCTEPW-EPYDXXXXXXXXXXXXXXXXXX--LNGRYVLVENLSMKD 368
            F             D  E   E YD                    L  R +  EN ++KD
Sbjct: 1137 FNSFRLPKGEIFEADHNESSIEQYDSWNKEGSGRSRKTEKAVRKKLRKRSMHQENQNIKD 1196

Query: 369  VECALYYGEPGYTSQDDDLSSLRSYPHRKHQKKTPDLESLTSPVTNHRKKLSSPKSPYFN 548
            +E  +YY     +S D      R +  RKHQKK           +N              
Sbjct: 1197 MEYEVYYDGSFNSSPDH---GHRYHDQRKHQKKIIKNACCEGVGSNF------------- 1240

Query: 549  GWRIREEAHLKEMESHSV-SHGCKRNQKNYDDCKFSHDKVGRFLVKPSYLIASDEEDEWE 725
               +  E    ++ S+S  +H C+       DC          L  P Y  ASD +D+ E
Sbjct: 1241 ---VTGEGRYDQLRSYSRGNHNCELAA----DCS---------LENPCYFSASDGKDKLE 1284

Query: 726  SPSRRQRXXXXXXXXXXXXNLQGKR------EDTLHNSHCSPDEAFCKKINTDRKGSRGA 887
             P+ +Q+            N + KR      +   H S  + D A    +   +K S+  
Sbjct: 1285 VPAGKQKRMTTLFQDGEPKNPEMKRASLPQKDGRNHKSGATLDGAH--SVQQPQKQSK-- 1340

Query: 888  TDKAMNNCIEEAEVIDCRPSCASSHDSCS-RVTSPWMHV-RPPYLRAMTMPPERPKELPS 1061
                      +AE ++ R     S  SC+  +TSPW  + + PYLRAMTMPPER ++  +
Sbjct: 1341 ----------KAERVEGRSDNLGSQGSCNGTMTSPWTKMAQSPYLRAMTMPPERTQDNCT 1390

Query: 1062 NQILKSTS---SLPKHQSHSKIGSPSYVHPKLPEYDDLAAKFRALKK 1193
            + IL+S S     P H SH        VHPKLP+YDDL AKF ALKK
Sbjct: 1391 DNILRSNSFPLQQPNHLSH--------VHPKLPDYDDLEAKFTALKK 1429


>ref|XP_002517951.1| protein with unknown function [Ricinus communis]
            gi|223542933|gb|EEF44469.1| protein with unknown function
            [Ricinus communis]
          Length = 647

 Score =  103 bits (256), Expect = 1e-19
 Identities = 104/397 (26%), Positives = 159/397 (40%), Gaps = 17/397 (4%)
 Frame = +3

Query: 57   ATLQHKVEKITRAASESPSCFSERSVVYLDDVMELQPNV-KDDKQKDQRLFVFTGNNPSV 233
            AT Q +V K+T A+SES   F E  +VYLDDV E+Q ++ K+    DQ +F F     + 
Sbjct: 295  ATDQDEVRKMTAASSESLPQFPEEMIVYLDDVEEVQHSIAKEGSSHDQSIFKFKSTILNK 354

Query: 234  RKD----CTEPWEPYDXXXXXXXXXXXXXXXXXXLNGRYVLVENLSMKDVECALYYGEPG 401
             K+      +P+E                        R +  ENL++KD+ C +YY +P 
Sbjct: 355  NKEGEGKYMDPYESCSDCSSSSSTRRRVKAAKKRTRRRSLSRENLTVKDIHCVIYYEKPN 414

Query: 402  YTSQDDDL---------SSLRSYPHRKHQKKTPDLESLTSPVTNHRKKLSSPKSPYFNGW 554
              S              + +RS  H  H +K  +            +        YF   
Sbjct: 415  KRSTTPGSHLRNKHYRENFVRSKEHSFHGEKRRNQPQSCQCFNPEAEDCCLNNLCYFCTG 474

Query: 555  RIREEAHLKEMESHSVSHGCKRN-QKNYDDCKFSHDKVGRFLVKPSYLIASDEED--EWE 725
              R+   +  ++   + HG +R   +NY  C            + S +I   + D   + 
Sbjct: 475  DGRDTKEVHFLKHDIIPHGLERKGDRNYFRC-----------CECSKIIVESDADMERYS 523

Query: 726  SPSRRQRXXXXXXXXXXXXNLQGKREDTLHNSHCSPDEAFCKKINTDRKGSRGATDKAMN 905
             P R QR                   D  H+S  + +    K+  T +  + G       
Sbjct: 524  YPPRPQRRSCDFG-------------DIEHDSFTNAEVKPYKQSKTTKGKANG------- 563

Query: 906  NCIEEAEVIDCRPSCASSHDSCSRVTSPWMHVRPPYLRAMTMPPERPKELPSNQILKSTS 1085
                     D      +++DS +R  +     +PPYLRAMTMP ER K    + I + + 
Sbjct: 564  --------FDSPGRDVATNDSLTRNVT-----KPPYLRAMTMPQERSKGSQGDDIFRYSR 610

Query: 1086 SLPKHQSHSKIGSPSYVHPKLPEYDDLAAKFRALKKE 1196
            S P   S+       +VHPKLP+YD++AAKF ALKKE
Sbjct: 611  SFPAQTSN-------HVHPKLPDYDEIAAKFIALKKE 640


>ref|XP_002319910.1| predicted protein [Populus trichocarpa] gi|222858286|gb|EEE95833.1|
            predicted protein [Populus trichocarpa]
          Length = 648

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 100/391 (25%), Positives = 148/391 (37%), Gaps = 10/391 (2%)
 Frame = +3

Query: 54   NATLQHKVE-KITRAASESPSCFSERSVVYLDDVMELQPNVKDDKQKDQRLFVFTGNNPS 230
            + T +HK E K+   +SES     E  +VYLDDV E+Q   K+   +D+R+F F  +   
Sbjct: 308  STTSKHKEERKMAGTSSESLPQLPEEMIVYLDDVEEVQSITKEGSCQDKRIFKFKSSRFL 367

Query: 231  VRKDCTEP------WEPYDXXXXXXXXXXXXXXXXXXLNGRY-VLVENLSMKDVECALYY 389
             +K+  E        + Y+                   + R  +  E+ S +D++C LYY
Sbjct: 368  PKKEKVEDSCDVKHMDQYESGSEKSSSSSSRRNTNVKRSRRRSISQEHSSAEDIQCMLYY 427

Query: 390  GEPGYTSQDDDLSSLRSYPHRKHQKKTPDLESLTSPVTNHRKKLSSPKSPYFNGWRIREE 569
             +P          S R     KH+ + P         + H+K  +  KS          +
Sbjct: 428  NKP----------SKRYTTDPKHKSQLP---------SKHQKNTAIGKSEETC------D 462

Query: 570  AHLKEMESHSVSHGCKRNQKNYDDCKFSHDKVGRFLVKPSYLIASDEEDEWESPSRRQRX 749
            A  ++ + H  +H C                    L  P Y   +D     E P   Q+ 
Sbjct: 463  AEKRQKQPHYSNHCC--------------------LNHPCYFCTNDGRVAHEVPPWNQKR 502

Query: 750  XXXXXXXXXXXNLQGKREDTLHNSHCSPDEAFCKKINTDRKGSRGATDKAMNNCIEEAEV 929
                        +     D     +  P +   K            T +      +    
Sbjct: 503  LLTVVHHCDCPTIG--ESDAEMERYAFPHQPRRKSCEFGASACDFFTSQDWQPDQQRKRN 560

Query: 930  IDCRPSCASSHDSCSRVTSPWMHVRP--PYLRAMTMPPERPKELPSNQILKSTSSLPKHQ 1103
              C  S  SS   C + TS      P  PYLRAMTMP ER K   + + ++  SS P   
Sbjct: 561  STC--SNVSSAYPCPKPTSSLTGKEPKAPYLRAMTMPQERSK-YSNRENVERCSSFP--- 614

Query: 1104 SHSKIGSPSYVHPKLPEYDDLAAKFRALKKE 1196
                I SP +VHPKLP+ DD+AAKF ALK+E
Sbjct: 615  ----IESPIHVHPKLPDCDDIAAKFTALKRE 641


>ref|XP_002305014.1| predicted protein [Populus trichocarpa] gi|222847978|gb|EEE85525.1|
            predicted protein [Populus trichocarpa]
          Length = 619

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 51/147 (34%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
 Frame = +3

Query: 786  LQGKREDTLHNSHCSPDEAF-------CKKINTDRKGSRGATDKAMNNCIEEAEVIDCRP 944
            ++G  +    +S  SP++ F       C K +    G++   +K +   +E  E  DC  
Sbjct: 470  VKGYVKSCKRSSRLSPEKKFRCCLEKSCYKCDGQVNGTQTQENKKL---METEESSDCPA 526

Query: 945  SCASSHDSCSRVTSPWMH---VRPPYLRAMTMPPERPKELPSNQILKSTSSLPKHQSHSK 1115
              ASS+DS S+  SP      + P  L+ MT+P         NQ + S   L K  + S 
Sbjct: 527  RYASSYDSSSQEPSPGSRKKTIPPKRLKGMTVPDN------DNQSISSQLELSKGSTAS- 579

Query: 1116 IGSPSYVHPKLPEYDDLAAKFRALKKE 1196
              S S+VHPKLP+YD++AAKF ALKKE
Sbjct: 580  --SCSHVHPKLPDYDEIAAKFIALKKE 604


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