BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027479
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   171   8e-41
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   160   1e-37
ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro...   160   1e-37
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   160   2e-37
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   157   2e-36

>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  171 bits (434), Expect = 8e-41
 Identities = 97/179 (54%), Positives = 116/179 (64%)
 Frame = -1

Query: 594 MSLRKFIKRFPSNSLILKTFTTFTSQPPLPPQIHSQTSLEQSQPQNQQDRKQKDPHSLMK 415
           M LR  IKR P   L+    TT T        I + T+L   Q + Q+    +DP+SLMK
Sbjct: 1   MWLRTSIKRLPLQPLL----TTITP-------IRTLTALSTHQEREQE----QDPYSLMK 45

Query: 414 EDPIQVYLDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSCVEDTGSFPP*NAIHFN 235
           EDPIQV   LW ++FS+    PFSNLTGFL KFDLWVLAYQRSC   TGSFPP NAIH  
Sbjct: 46  EDPIQVCSSLWVRSFSNQTHAPFSNLTGFLSKFDLWVLAYQRSCAHFTGSFPPRNAIHSQ 105

Query: 234 VLRDLLSLQTVVLNGQFVWGMKTDLILRSPNDKLGTKVLSKRKLQALLESDKRSFQDRV 58
           VLRDLLSLQ  V+ G+F W  K    +RSPN+K  T+  SKRK+Q++LES+   FQDRV
Sbjct: 106 VLRDLLSLQNAVVRGRFSWNHKIHSYIRSPNEKPLTEFTSKRKIQSILESNAPCFQDRV 164


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  160 bits (406), Expect = 1e-37
 Identities = 86/183 (46%), Positives = 112/183 (61%), Gaps = 4/183 (2%)
 Frame = -1

Query: 594 MSLRKFIKRFPSNSLILKTFTTFTSQPPLPPQIHS----QTSLEQSQPQNQQDRKQKDPH 427
           M  R  IK    N       ++F       P +HS      SL    P +  D   +DP+
Sbjct: 1   MLFRTTIKHLQFNRRTFVNSSSFAPFNSSSPALHSPHPPSISLRLQNPPHLHD---EDPY 57

Query: 426 SLMKEDPIQVYLDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSCVEDTGSFPP*NA 247
           S +KEDPI +   +W K F+      FS+L+ FL KFDLWVLAYQRSC + TG+FPP NA
Sbjct: 58  SHLKEDPIDICSSIWLKAFASLPNSSFSHLSSFLSKFDLWVLAYQRSCADLTGNFPPRNA 117

Query: 246 IHFNVLRDLLSLQTVVLNGQFVWGMKTDLILRSPNDKLGTKVLSKRKLQALLESDKRSFQ 67
           IH +VLRDLLSL+  V+NG+F W  K + ++R PNDK  T ++SKRKL+A+LESD+  FQ
Sbjct: 118 IHSHVLRDLLSLRNAVINGKFSWNRKANQLIRCPNDKSRTHLISKRKLRAMLESDEPCFQ 177

Query: 66  DRV 58
           DRV
Sbjct: 178 DRV 180


>ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 697

 Score =  160 bits (406), Expect = 1e-37
 Identities = 86/183 (46%), Positives = 112/183 (61%), Gaps = 4/183 (2%)
 Frame = -1

Query: 594 MSLRKFIKRFPSNSLILKTFTTFTSQPPLPPQIHS----QTSLEQSQPQNQQDRKQKDPH 427
           M  R  IK    N       ++F       P +HS      SL    P +  D   +DP+
Sbjct: 1   MLFRTTIKHLQFNRRTFVNSSSFAPFNSSSPALHSPHPPSISLRLQNPPHLHD---EDPY 57

Query: 426 SLMKEDPIQVYLDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSCVEDTGSFPP*NA 247
           S +KEDPI +   +W K F+      FS+L+ FL KFDLWVLAYQRSC + TG+FPP NA
Sbjct: 58  SHLKEDPIDICSSIWLKAFASLPNSSFSHLSSFLSKFDLWVLAYQRSCADLTGNFPPRNA 117

Query: 246 IHFNVLRDLLSLQTVVLNGQFVWGMKTDLILRSPNDKLGTKVLSKRKLQALLESDKRSFQ 67
           IH +VLRDLLSL+  V+NG+F W  K + ++R PNDK  T ++SKRKL+A+LESD+  FQ
Sbjct: 118 IHSHVLRDLLSLRNAVINGKFSWNRKANQLIRCPNDKSRTHLISKRKLRAMLESDEPCFQ 177

Query: 66  DRV 58
           DRV
Sbjct: 178 DRV 180


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  160 bits (405), Expect = 2e-37
 Identities = 89/179 (49%), Positives = 110/179 (61%)
 Frame = -1

Query: 594 MSLRKFIKRFPSNSLILKTFTTFTSQPPLPPQIHSQTSLEQSQPQNQQDRKQKDPHSLMK 415
           MS RK ++ F      L +F+        P   HS      SQP NQ     +DPHSLMK
Sbjct: 1   MSFRKIVEHFQYRRSTLSSFSR-------PFSTHS------SQPPNQN----QDPHSLMK 43

Query: 414 EDPIQVYLDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSCVEDTGSFPP*NAIHFN 235
           +DPI++   LW KTFS S T  F NLTGFL  FDLW+LAYQRSC   TG+FPP NA+H  
Sbjct: 44  QDPIEICTSLWVKTFSSSTTS-FPNLTGFLSNFDLWLLAYQRSCAHATGTFPPRNAVHAT 102

Query: 234 VLRDLLSLQTVVLNGQFVWGMKTDLILRSPNDKLGTKVLSKRKLQALLESDKRSFQDRV 58
           VL  LLSL+  V+  +F W  KT+ +LR+PND   +K LSKRK +A ++S K  FQDRV
Sbjct: 103 VLHSLLSLRNAVIRNRFEWNDKTNPLLRAPNDAAVSKPLSKRKFRAAIQSGKPCFQDRV 161


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  157 bits (396), Expect = 2e-36
 Identities = 85/179 (47%), Positives = 109/179 (60%)
 Frame = -1

Query: 594 MSLRKFIKRFPSNSLILKTFTTFTSQPPLPPQIHSQTSLEQSQPQNQQDRKQKDPHSLMK 415
           MS+R  IK  PS S   K+  +F+S P     IH                  +DP+SL+K
Sbjct: 1   MSVRTLIKHLPSTSSFYKSLRSFSSLP-----IH------------------QDPYSLLK 37

Query: 414 EDPIQVYLDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSCVEDTGSFPP*NAIHFN 235
           +DPI++   LW K+FS      F NLTGFL K DLWVLAYQRSC + TG+FPP NA+H  
Sbjct: 38  QDPIEICTSLWVKSFSSPPNTTFPNLTGFLSKLDLWVLAYQRSCAQVTGTFPPRNALHSQ 97

Query: 234 VLRDLLSLQTVVLNGQFVWGMKTDLILRSPNDKLGTKVLSKRKLQALLESDKRSFQDRV 58
            L  LLSLQ  V++ +F W  KT  I+RSPNDK  TK++SK KL+A++ S+   FQDRV
Sbjct: 98  TLHSLLSLQNAVVHNRFKWNDKTRQIIRSPNDKPFTKLVSKTKLKAMVNSNDPCFQDRV 156