BLASTX nr result

ID: Coptis23_contig00027478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027478
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263048.2| PREDICTED: ATPase 10, plasma membrane-type-l...   139   3e-31
emb|CBI35782.3| unnamed protein product [Vitis vinifera]              139   3e-31
emb|CAN80223.1| hypothetical protein VITISV_027896 [Vitis vinifera]   139   3e-31
ref|XP_003521833.1| PREDICTED: ATPase 10, plasma membrane-type-l...   136   2e-30
ref|XP_002326625.1| autoinhibited H+ ATPase [Populus trichocarpa...   135   5e-30

>ref|XP_002263048.2| PREDICTED: ATPase 10, plasma membrane-type-like isoform 2 [Vitis
           vinifera]
          Length = 952

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/96 (76%), Positives = 77/96 (80%)
 Frame = -1

Query: 290 SVVIATGVYSFLGKAAYLVDSTNAVGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHL 111
           +VVIATGV+SF GKAA+LVDST  +GHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQH 
Sbjct: 217 AVVIATGVHSFFGKAAHLVDSTEVIGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHR 276

Query: 110 SYRRXXXXXXXXXXXXXXIAMPTVLSVTLAIGSHRL 3
           SYR               IAMPTVLSVTLAIGSHRL
Sbjct: 277 SYRNGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312


>emb|CBI35782.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/96 (76%), Positives = 77/96 (80%)
 Frame = -1

Query: 290 SVVIATGVYSFLGKAAYLVDSTNAVGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHL 111
           +VVIATGV+SF GKAA+LVDST  +GHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQH 
Sbjct: 217 AVVIATGVHSFFGKAAHLVDSTEVIGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHR 276

Query: 110 SYRRXXXXXXXXXXXXXXIAMPTVLSVTLAIGSHRL 3
           SYR               IAMPTVLSVTLAIGSHRL
Sbjct: 277 SYRNGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312


>emb|CAN80223.1| hypothetical protein VITISV_027896 [Vitis vinifera]
          Length = 938

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/96 (76%), Positives = 77/96 (80%)
 Frame = -1

Query: 290 SVVIATGVYSFLGKAAYLVDSTNAVGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHL 111
           +VVIATGV+SF GKAA+LVDST  +GHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQH 
Sbjct: 229 AVVIATGVHSFFGKAAHLVDSTEVIGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHR 288

Query: 110 SYRRXXXXXXXXXXXXXXIAMPTVLSVTLAIGSHRL 3
           SYR               IAMPTVLSVTLAIGSHRL
Sbjct: 289 SYRNGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 324


>ref|XP_003521833.1| PREDICTED: ATPase 10, plasma membrane-type-like [Glycine max]
          Length = 934

 Score =  136 bits (343), Expect = 2e-30
 Identities = 70/96 (72%), Positives = 76/96 (79%)
 Frame = -1

Query: 290 SVVIATGVYSFLGKAAYLVDSTNAVGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHL 111
           +VVIATGV+SF GKAAYLVDST  VGHFQKVLTSIGNFCICSIA+GMI EII+MFP++H 
Sbjct: 217 AVVIATGVHSFFGKAAYLVDSTEVVGHFQKVLTSIGNFCICSIAIGMIFEIIIMFPVEHR 276

Query: 110 SYRRXXXXXXXXXXXXXXIAMPTVLSVTLAIGSHRL 3
           SYR               IAMPTVLSVTLAIGSHRL
Sbjct: 277 SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312


>ref|XP_002326625.1| autoinhibited H+ ATPase [Populus trichocarpa]
           gi|222833947|gb|EEE72424.1| autoinhibited H+ ATPase
           [Populus trichocarpa]
          Length = 950

 Score =  135 bits (339), Expect = 5e-30
 Identities = 71/96 (73%), Positives = 76/96 (79%)
 Frame = -1

Query: 290 SVVIATGVYSFLGKAAYLVDSTNAVGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHL 111
           +VVIATGV SF GKAA+LVDST  VGHFQKVLT+IGNFCICSIAVGMILEII+MFP+QH 
Sbjct: 217 AVVIATGVNSFFGKAAHLVDSTEVVGHFQKVLTAIGNFCICSIAVGMILEIIIMFPVQHR 276

Query: 110 SYRRXXXXXXXXXXXXXXIAMPTVLSVTLAIGSHRL 3
           SYR               IAMPTVLSVTLAIGSHRL
Sbjct: 277 SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312


Top