BLASTX nr result

ID: Coptis23_contig00027474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027474
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538187.1| PREDICTED: transcription repressor MYB6-like...   151   5e-35
ref|XP_002270359.1| PREDICTED: transcription factor RAX1 [Vitis ...   150   1e-34
ref|NP_001242459.1| uncharacterized protein LOC100779919 [Glycin...   150   1e-34
ref|XP_002331475.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002326376.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>ref|XP_003538187.1| PREDICTED: transcription repressor MYB6-like [Glycine max]
          Length = 329

 Score =  151 bits (382), Expect = 5e-35
 Identities = 73/95 (76%), Positives = 79/95 (83%), Gaps = 6/95 (6%)
 Frame = +2

Query: 2   SCRLRWLNYLRPNIKHGEFSDDEDRIICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTK 181
           SCRLRWLNYLRPNIKHG+FSD+EDRIICSL+ +IGSRWSIIAAQLPGRTDNDIKNYWNTK
Sbjct: 53  SCRLRWLNYLRPNIKHGDFSDEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTK 112

Query: 182 LKKKLMGFSPSQRKPQQSHFPSSF------LTPSA 268
           LKKKLMG  P     +Q  FPSSF      L+PSA
Sbjct: 113 LKKKLMGLLPLSHHRKQPSFPSSFTLQNPPLSPSA 147


>ref|XP_002270359.1| PREDICTED: transcription factor RAX1 [Vitis vinifera]
           gi|297739959|emb|CBI30141.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/92 (79%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   SCRLRWLNYLRPNIKHGEFSDDEDRIICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTK 181
           SCRLRWLNYLRPNIKHGEFSDDEDRIICS+FASIGS+WS+IA  LPGRTDNDIKNYWNTK
Sbjct: 53  SCRLRWLNYLRPNIKHGEFSDDEDRIICSVFASIGSKWSVIANYLPGRTDNDIKNYWNTK 112

Query: 182 LKKKLMGFSP-SQRKPQQSHFPSSFLTPSASS 274
           LKKKLMG  P SQRKP Q+ F     T S+ S
Sbjct: 113 LKKKLMGMVPVSQRKPHQATFSHHLQTYSSLS 144


>ref|NP_001242459.1| uncharacterized protein LOC100779919 [Glycine max]
           gi|255637134|gb|ACU18898.1| unknown [Glycine max]
          Length = 315

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/91 (78%), Positives = 76/91 (83%)
 Frame = +2

Query: 2   SCRLRWLNYLRPNIKHGEFSDDEDRIICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTK 181
           SCRLRWLNYLRPNIKHG+FSD+EDRIICSL+ +IGSRWSIIAAQLPGRTDNDIKNYWNTK
Sbjct: 53  SCRLRWLNYLRPNIKHGDFSDEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTK 112

Query: 182 LKKKLMGFSPSQRKPQQSHFPSSFLTPSASS 274
           LKKKLMG  P     +Q  FPSS L  S  S
Sbjct: 113 LKKKLMGLLPLSHHRKQPSFPSSTLQNSPPS 143


>ref|XP_002331475.1| predicted protein [Populus trichocarpa] gi|222873553|gb|EEF10684.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/91 (81%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   SCRLRWLNYLRPNIKHGEFSDDEDRIICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTK 181
           SCRLRWLNYLRPN+KHGEFSD+EDR+ICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTK
Sbjct: 53  SCRLRWLNYLRPNLKHGEFSDEEDRVICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTK 112

Query: 182 LKKKLMGFSP-SQRKPQQSHFPSSFLTPSAS 271
           LKKKLM  +P SQRKP    F S   TP  S
Sbjct: 113 LKKKLMAMAPQSQRKPPT--FQSPHQTPPLS 141


>ref|XP_002326376.1| predicted protein [Populus trichocarpa] gi|222833569|gb|EEE72046.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/87 (85%), Positives = 79/87 (90%), Gaps = 2/87 (2%)
 Frame = +2

Query: 2   SCRLRWLNYLRPNIKHGEFSDDEDRIICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTK 181
           SCRLRWLNYLRPNIKHGEFSDDEDRIICSL+A+IGSRWSIIAAQLPGRTDNDIKNYWNTK
Sbjct: 53  SCRLRWLNYLRPNIKHGEFSDDEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTK 112

Query: 182 LKKKLMG-FSP-SQRKPQQSHFPSSFL 256
           LKKKLMG  +P +QRKP Q+   SS L
Sbjct: 113 LKKKLMGVMNPIAQRKPHQAALFSSLL 139


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